Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30563g00005 ATGGCAGAGGTCATCAACATGCCCTCCGATTCCGTCGACAAATCCCCTTCCTCTTCTGCTCCACCACCTCCCCCTCCACCTCCTGCTCCTCCCTCTTCCTCCGCTTCCGCCACTGCCTCCGTTTCCGCCGCCGCAAATGACGATCTACCACCTCCGCCTCCCCCACCGCCGCATAACTCCTCCCGAAGGAGAGACCGGGACAGGGACAGAAGGGACGATAGGGATTTCGATCGCCACTCTCACCGTCGTGGTGGCGGTGGCGGGGATTACTACGACAGAAACATGTCTCCGCCTCCGCCCCCTCCCAGGGACAGGGATAGAGACAGAGACTTCAAGCGCCGTCGCAGCCCCAGCCCTCCGCACCGCGACCGCCGCTATTCTCCTGCCTCACGTCGCTCCCCTCCGCCGTATAAACGATCCAGAAGGGGTAGTCCTCGTGGTGGTTATGGTCCCGATGACAGGTTTGGGTATGATTATTATGGTGGCTATGATAGGGGAGTGGGTGGAAGATCTGGTTATGCAGATGATAAGTCTTATGGAAGGTTNNNNNNNNNNACTGGGGGATATCAAAATGGGATTTCTGATATGGAATCCAATCGTGGTTATGCAGACATGCCAAGTGGTGGTGCACAAAGAGAAGGATTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTGCCAGCTGAAGCAGAACGTAGATATCAAGAGTACAGATCAGAATACATTTCTACCCAAAAGCGAGCTTATTTTAATGCACATAAGGATGAGGACTGGTTGAAAGATAAATATCATCCTACAAATTTACTCTCAGTCATTGAAAGGAGGAATGAAAACGCTCGACAGCTGGCCAAGAATTTTTTGCTGGATTTGCAGAGTGGAACATTAGATCTAAATCCTGGTTTAAATGCCTCTTCATCCACCAAATCAGGACCAACTAGTGAACCAAATTCTGAGGAGGAAACAGATACTGGAGGTAAAAGAAGAAGACATGGTAGGGGATCTGATAAAGACAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTGCCAGTTCTGAACCTAGACGGATACAAATTGATGTTCAACAAGCTCAGGCACTTGTTCGTAAGCTTGACACAGAAAAAGGAATTGAAGATAATATTTTATCCAGCAGTAATCACAATAAAAATGACGACAAAGCTCACAGTGGCTCTGTGGGTCCCATAATAATTATCCGGGGCCTGACATCTGTGAAAGGTTTAGAGGGTGTTGAGCTTTTGGACACACTTATTACATACCTTTGGCGGATTCATGGTGTTGACTATTACGGTATGATTGAGACTAATGAGCCCAAGGGTTTTAGGCATGTGAGGGCAGAAGGAAATGGGCATGAAGAAATAGGCAGGTCAGGATCTGAATGGGAGAAGAAACTTGACTCATTTTGGCAGGGAAGGCTGAATAGTCAGGATCCTTTGGAAGTTATGACTGCTAAGGAGAAGATAGATGCTGCAGCAGTTGAGGTGTTGGATCCCTATGTGCGGAAAATTAGGGATGAAAAGTATGGATGGAAATATGGTTGTGGAGCCAAGAGCTGCACAAAGCTTTTTCATGCAGCAGAATTTGTGCACAAACATCTGAAGCTAAAACACCCAGAACTTGTTATGGAACAAACTTCAAAACTGCGTGAGGATCTCTATTTTCAAAATTACATGAATGATCCAGATGCTCCAGGTGGAACGCCTATCATGCAGCAACCTCAGAAGGATAGGCCTTTAAAGCGAAGATTAGGACTGGAAGGTCGGTTGAGAGATGATCGTGGTAATCGTCGAGATCATGATCGGAGTGACAGGATAAATGATGGAGATAGGCCAGAGGGTTCCCCTAACCGTGACAGGCAATCTAAAACTCTCGAGATGGGGAATCATGATGAAACCATGTATGATACATTTGCAGGTCCTGGGGTACCTCCATTTACTTCTGATATGCCTCCTCCACCAGTGTTGATGCCTGTACCTGGTGCTGGGCCGTTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGAGAACAAGGAGGACCATCATATGATGCCCCAGGTAGGAAGATGCGCGCTGGCCATCCCATGGGTGGACCAGCACCAATAATTGCTGTTCCTCCAGCTTTCAGACAAGATCCTCGGCGGATGCGCAGCTATCAAGATCTCGATGCACCGGAGGACGAGGTCACTGTGATAGATTACCGGAGTTTATGA 2253 0.4785 MAEVINMPSDSVDKSPSSSAPPPPPPPPAPPSSSASATASVSAAANDDLPPPPPPPPHNSSRRRDRDRDRRDDRDFDRHSHRRGGGGGDYYDRNMSPPPPPPRDRDRDRDFKRRRSPSPPHRDRRYSPASRRSPPPYKRSRRGSPRGGYGPDDRFGYDYYGGYDRGVGGRSGYADDKSYGRXXXXTGGYQNGISDMESNRGYADMPSGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYRSEYISTQKRAYFNAHKDEDWLKDKYHPTNLLSVIERRNENARQLAKNFLLDLQSGTLDLNPGLNASSSTKSGPTSEPNSEEETDTGGKRRRHGRGSDKDNDFSAAPKAHPASSEPRRIQIDVQQAQALVRKLDTEKGIEDNILSSSNHNKNDDKAHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEPKGFRHVRAEGNGHEEIGRSGSEWEKKLDSFWQGRLNSQDPLEVMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAAEFVHKHLKLKHPELVMEQTSKLREDLYFQNYMNDPDAPGGTPIMQQPQKDRPLKRRLGLEGRLRDDRGNRRDHDRSDRINDGDRPEGSPNRDRQSKTLEMGNHDETMYDTFAGPGVPPFTSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSYDAPGRKMRAGHPMGGPAPIIAVPPAFRQDPRRMRSYQDLDAPEDEVTVIDYRSL 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30563g00005 750 ProSitePatterns Zinc finger C2H2 type domain signature. 523 546 IPR013087 -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 17 33 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 1 209 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 99 129 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 691 735 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 59 88 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 323 346 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 584 638 - -
Stsc30563g00005 750 Pfam Arsenite-resistance protein 2 465 651 IPR007042 -
Stsc30563g00005 750 Pfam SERRATE/Ars2, N-terminal domain 219 300 IPR021933 -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 298 364 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 298 322 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 561 666 - -
Stsc30563g00005 750 MobiDBLite consensus disorder prediction 382 401 - -
Stsc30563g00005 750 PANTHER ARSENITE-RESISTANCE PROTEIN 2 61 748 IPR039727 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30563g00005 Stsc-Chr30563 12334 19849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30563g00005 98 750 C2H2 Transcription Factor Family AT2G27100 64.905 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30563g00005 K27103 - gmx:100811300 965.296