Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30558g00001 ATGACTTTACTTCCCTTAAAGTTTAGTGAGATTAGACCTCCATGGTTTGATGCTTTTTTCATTTGTGGCCCCCCAATGCAATGCAAGAATGACAAACAATGGGGTGTTCCGTTTTTCTGCCTAACCGCCACCGCCGCACCTCATCTTCTTCGTGCGATCTACGTGCTCAAGATAGGAATAGAAACCTTGAAGCAGAACGTAGCGTGTGCGCTTCTCAGCTTAGCGCTGGTGGAGGAGAACAAGAGCTCGATCGGTGCATCTGGTGCGATTCCGCCATTGGTGTCGCTGCTGATGGACAACTCTAGCCGTGAGAAAAAGGACCCGTTGACGACTCTATACAAGCTGTGCTCGTTGAAGCAGAACAAAGAACAGGCAGTGAGTTCCGACGCGGTGAGGCCGCTGGTTGAGTTTGTGGTTAAAACAATTGTAGACAGGTGA 438 0.4932 MTLLPLKFSEIRPPWFDAFFICGPPMQCKNDKQWGVPFFCLTATAAPHLLRAIYVLKIGIETLKQNVACALLSLALVEENKSSIGASGAIPPLVSLLMDNSSREKKDPLTTLYKLCSLKQNKEQAVSSDAVRPLVEFVVKTIVDR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30558g00001 145 SUPERFAMILY ARM repeat 58 138 IPR016024 -
Stsc30558g00001 145 Gene3D - 31 141 IPR011989 -
Stsc30558g00001 145 PANTHER U BOX DOMAIN-CONTAINING 53 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30558g00001 Stsc-Chr30558 31946 33284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30558g00001 53 140 U-box Gene Family AT2G28830 43.182 2.48e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30558g00001 - - gmx:100806768 134.035