Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30557g00005 ATGATTCAAGCTGCTCACGTTGGTGTTGGCATAAGCGGGTTGGAGGGGATGCAAGCTGTGATGGCCAGTGACTTTGCTATTGCCCAGTTTCGATTTCTTGCCGATTTGCTTCTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACATTCACTCTAACCCAATTTTGGTTTACATTTCAAGCTGGGTTTTCTGGCCAGAGATTCTATGACGATTGGTTTCAGTCATTATATAATGTCATCTTCACAGCATTGCCTGTGATCATTGTTGGACTATTTGACAAGGATGTCAGCGCTACTCTATCCAAGAAGTATCCTGAATTATACATGGAAGGAATAAGAAATATGTTTTTTAAGTGGAGAGTTGTGGCTATATGGGCCTTTTTTTCTCTCTACCAGTCTCTTATATTCTATTACTTCGTGAGCACATCAAGTTTAAGTGGTAAAAATTCAGCAGGCAAAATTCTTGGACTCTGGGATGTCAGTACAATGGCCTTCACATGCGTTGTAGTAACTGTCAACTTGCGACTTCTCATGATTTGTAATTCAATCACAAGATGGCACTATATTAGCGTTGGTGGAAGTATTTTAGCATGGTTTATTTTTATTTTCTTATATTCAGGGATCAGCACTCCTTATGATCGACAGGAGAATATGTATTTCGTCATATATGTTTTGATGAGCACATTATATTTCTACCTGACACTACTACTTGTTCCTGTTGCTGCACTTTTCTGTGATTTTATTTACCAAGGGGTTCAGAGATGGTTCTTCCCATATGATTATCAAATTATTCAAGAAATGCATAGAGATGATGATAATGATACCAGCAGAGCACACCTGTTAGAAATAGGGAACCACCTTACACCAGATGAGGCTAGGAGCCATGCCATATCTCAACTCCCACGTGAGTTATCAAAGCACACTGGGTTTGCTTTCGACTCACCTGGTTACGAGTCATTTTTTGCTGCACAGCTTGGTGTATTTGCTCCAACAAAGGCATGGGATGTTGCAAGACGTGCTAGCATGAAATCTAGGCCAAAGATTGGACATACGTAA 1092 0.402 MIQAAHVGVGISGLEGMQAVMASDFAIAQFRFLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQAGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSATLSKKYPELYMEGIRNMFFKWRVVAIWAFFSLYQSLIFYYFVSTSSLSGKNSAGKILGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFIFIFLYSGISTPYDRQENMYFVIYVLMSTLYFYLTLLLVPVAALFCDFIYQGVQRWFFPYDYQIIQEMHRDDDNDTSRAHLLEIGNHLTPDEARSHAISQLPRELSKHTGFAFDSPGYESFFAAQLGVFAPTKAWDVARRASMKSRPKIGHT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30557g00005 363 Gene3D - 1 37 IPR023214 -
Stsc30557g00005 363 SUPERFAMILY Calcium ATPase, transmembrane domain M 41 270 IPR023298 -
Stsc30557g00005 363 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 319 - -
Stsc30557g00005 363 Pfam Phospholipid-translocating P-type ATPase C-terminal 20 270 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30557g00005 Stsc-Chr30557 36696 38692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30557g00005 1 360 Primary Pumps ATPases AT1G59820 77.778 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30557g00005 K14802 - gmx:100815547 674.085