Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30556g00007 ATGGTTTTACCACTTGGTTCACTGACCATAGGATTGGCTAGGCATCGTGCCTTGTTATTTAAGGTTTTAGCTGATAGTCTGGGCATCCCATGTCAGCTGGTGAAAGGACTACAATATACAGGTTCCGACAATGTGGCTATGAACTTTGTCAAGCTTGATGACGGAAGGGAGTACATTGTTGACCTGATGGCAGATCCAGGGACACTTATTCCATCTGATGCAGCTGGATCACACATCGATTATGATGAATCTTCTTTTGTAGCTACTCCTTCATCAAGAGACCTTGACTCCTCTCATATGGCATCATTTGGAAGTGGGGTTGGAAGTTCATTTGAAGGAACTCTAGACTTTGGGACACAAGATAAAGGAAACAGATCGAAACATTCTATCCATGCAGGGAAGGAATCTGATGTAATCAGTCCCTCTACAAGCAGGGAAGAATTAAAGAATGCCATAGATGAATTCAAAGGTACTAATAATGTGGAAAAGTTCATAGTGAGAGAATCTCCTATCAGACATAATTATCCATATAAGCATGGAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCCGTGCGTGGAATGAAAGTCAACGATGTCTCCCAATATATGATTGATGCTGCAAAGGAGAACCCTAACTTAGCTCAAAAACTTCATGACGTTTTACTTGAAAGTGGCGTTGTTGCTCCTCCAAACCTATTTTCTGAAATTTATCATGAGCAGCTAGGTTCCCCAGCTGAGGCAAATTCTTCAGTTGATGAAAAGGCTGAAACAAAGCAGGGACGTATGCAGCAAGAAACCAAGGTTGATGATAATCAAGTTCTTGCTCAGTTTTTACCTCCTTTGCCCCTTCAGAGAGCTCATTCGAAATTAAGTCCTCGCAGCCAGCTGGACCATGCTAAGCCTGTAGAAGGTTTGGGAATCAAGTTACCTCTTGATACAAGGGAAGCTACTGGGCAGCAAATACCATCTCAGGCAGAAGCATCTCAAGTAAAATATGGGAAAAATGTCCCAGTTGCTGCAGCTGCTGCCGCCGCTGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCTGTGGCGAAGTCAAGTGCTGACTCAAATCTTGAGATTCCAGTAGCAGCAGCTGCCACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCCGCTGTCAGTAAACAGTATGAGCAGGGTAGTCGAAGTGATGCAGATACAGAGGGTTTTGGTCATGAGCTGAGGGGCAGTGGTGATGGAGAGCACATTGCTTTAGGATCAAACTTAGAGGGTGAAAGAATATCTGATAGATCAGCAAGAAGTGACAGTGCAAAATCGGATTCTGCCCTAGATGATGTTGCTGAGTATGACATTCCATGGGAGGAAATCACGATGGGCGAGCGTATTGGGCTTGGATCATATGGGGAAGTGTACCACGGTGATTGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTTTAGATCAAGATATCTCTGGTGAATTGCTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAGAGACTGAGGCATCCAAACGTTGTTCTCTTCATGGGAGCTGTAACGCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCTAGAGGGAGCTTGTATAGGTTAATTCACCGACCTAACAATCAACTAGATGAGCGAAGGCGGTTGAGGATGGCCTTAGATGCTGCTCGTGGAATGAACTATTTGCACAACTGCACTCCAGTAATAGTGCATCGTGATTTGAAGTCCCCTAATCTTCTTGTAGACAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGCTTATCGCGAATTAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCTTTCCAATGAAAAGTGTGATGTGTATAGCTTTGGGGTTATATTGTGGGAGCTCTCTACCCTGCAGCAACCATGGGGAGGGATGAATCCGATGCAAGTTGTTGGTGCTGTTGGTTTCCAACATCGCCGTCTTGACATTCCAGATGATGTGGACCCTGCAGTTGCAGATATTATCAGGCAATGCTGGCAGACAGATCCCAAGTTGAGACCCACATTTACCGAAATCATGGCTGCTTTAAAGCCATTGCAGAAGCCCATTACTGGTTCTCAAGTGCTAAGAACAAGTGCTCAGTCATCTAGAGTTGCCGAAGACCCCGCAAGATAG 2226 0.4456 MVLPLGSLTIGLARHRALLFKVLADSLGIPCQLVKGLQYTGSDNVAMNFVKLDDGREYIVDLMADPGTLIPSDAAGSHIDYDESSFVATPSSRDLDSSHMASFGSGVGSSFEGTLDFGTQDKGNRSKHSIHAGKESDVISPSTSREELKNAIDEFKGTNNVEKFIVRESPIRHNYPYKHGRSPSWTEGISSPAVRGMKVNDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHEQLGSPAEANSSVDEKAETKQGRMQQETKVDDNQVLAQFLPPLPLQRAHSKLSPRSQLDHAKPVEGLGIKLPLDTREATGQQIPSQAEASQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSADSNLEIPVAAAATATAAAVVATTAAVSKQYEQGSRSDADTEGFGHELRGSGDGEHIALGSNLEGERISDRSARSDSAKSDSALDDVAEYDIPWEEITMGERIGLGSYGEVYHGDWHGTEVAVKRFLDQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRIKHSTFLSSRSTAGTAEWMAPEVLRNELSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPAVADIIRQCWQTDPKLRPTFTEIMAALKPLQKPITGSQVLRTSAQSSRVAEDPAR 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30556g00007 741 MobiDBLite consensus disorder prediction 114 145 - -
Stsc30556g00007 741 MobiDBLite consensus disorder prediction 254 268 - -
Stsc30556g00007 741 CDD STKc_MAP3K-like 467 713 - -
Stsc30556g00007 741 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 246 723 - -
Stsc30556g00007 741 FunFam Serine/threonine-protein kinase isoform 1 452 539 - -
Stsc30556g00007 741 ProSiteProfiles Protein kinase domain profile. 461 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30556g00007 741 MobiDBLite consensus disorder prediction 395 444 - -
Stsc30556g00007 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Stsc30556g00007 741 Gene3D Transferase(Phosphotransferase) domain 1 540 723 - -
Stsc30556g00007 741 SUPERFAMILY Protein kinase-like (PK-like) 449 712 IPR011009 -
Stsc30556g00007 741 Pfam Protein tyrosine and serine/threonine kinase 461 713 IPR001245 GO:0004672|GO:0006468
Stsc30556g00007 741 FunFam Serine/threonine-protein kinase CTR1 540 723 - -
Stsc30556g00007 741 ProSitePatterns Protein kinases ATP-binding region signature. 467 488 IPR017441 GO:0005524
Stsc30556g00007 741 SMART serkin_6 461 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30556g00007 741 MobiDBLite consensus disorder prediction 399 417 - -
Stsc30556g00007 741 MobiDBLite consensus disorder prediction 246 273 - -
Stsc30556g00007 741 Pfam Ethylene-responsive protein kinase Le-CTR1 1 70 - -
Stsc30556g00007 741 Gene3D Phosphorylase Kinase; domain 1 454 538 - -
Stsc30556g00007 741 PRINTS Tyrosine kinase catalytic domain signature 535 548 IPR001245 GO:0004672|GO:0006468
Stsc30556g00007 741 PRINTS Tyrosine kinase catalytic domain signature 574 592 IPR001245 GO:0004672|GO:0006468
Stsc30556g00007 741 PRINTS Tyrosine kinase catalytic domain signature 640 662 IPR001245 GO:0004672|GO:0006468
Stsc30556g00007 741 PRINTS Tyrosine kinase catalytic domain signature 621 631 IPR001245 GO:0004672|GO:0006468
Stsc30556g00007 741 PRINTS Tyrosine kinase catalytic domain signature 684 706 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30556g00007 Stsc-Chr30556 23005 30455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30556g00007 1 735 MAP Kinase Kinase Kinase AT1G73660 64.730 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc30556g00007 PK_Tyr_Ser-Thr 2.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30556g00007 - - gmx:100778331 1125.54