Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30554g00006 ATGGAGGAAGTGGACCTTGACGGTGGCGGTGGCAGTGGTCGCAAGTATCGGCCTGTGCTGGACAGCGATCGTGCGGTGCTTGAGATGTCTTCAATGGATCCTGGATCTTCCTCCGCTGCCTCTTCTTCTCAACCTCCTCCTAATCTCAGAAAAATAAACGTGGAATCGAAGCTTGAACTGTTTGGTTTTGATTCCCTTGTCAATATACTTGGTCTTAAAAGCATGACTAGTGAGCAAGCTGTGCAACCGTCTAGTCCTAGAGAAGGCGAAGATATTTCTATCACCGTTGGGGAGCCAAAGCCTGCTGCTCCCAAGCTGGGTACAATGATGGGTGTATTCATTCCATGCATACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGAATGGCTGGCATAGGAGAGTCATTTCTGCTGGTTGCAATATGTGGCTTGTGTACTTTTCTTACTTCAATATCATTGAGTGCCATTGCAACTAATGGTGCTATGAAGGGAGGGGGACCGTACTATCTAATAGGGCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTATATGTTTCTTCCTTGGGAATGCTGTTGCTGGAGCACTTTACGTATTGGGAGCTGTGGAAACATTTTTGAAAGCAGTTCCTGCTGCTGGGATTTTTAGAGAGACTGTCAGCCATGTTAATGGTACTGCAGTGACACCAATAGAAGCTCCAAGTGCTCATGATCTGCAAATTTATGGGATTGTTGTGACCATTCTTTTATGCTTTATTGTATTTGGAGGAGTAAAGATGATAAATCGGGTTGCACCTGCATTTCTCATTCCTGTTTTATTCTCAGTCATCTGCATATGGTTGGGAATGTTTGTGGCAGGGGAGGATAAACCTACAGAGGGATTTACTGGTTTGAGTTGGGAGACAATTAAAGATAACTGGAGTTCAGATTATCAAAAAACTAATGATGCTGGAATCCCAGAACCTGATGGCCATGTAAGCTGGAATTTCAAGTAG 1014 0.4438 MEEVDLDGGGGSGRKYRPVLDSDRAVLEMSSMDPGSSSAASSSQPPPNLRKINVESKLELFGFDSLVNILGLKSMTSEQAVQPSSPREGEDISITVGEPKPAAPKLGTMMGVFIPCIQSILGIIYYIRFSWIVGMAGIGESFLLVAICGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGICFFLGNAVAGALYVLGAVETFLKAVPAAGIFRETVSHVNGTAVTPIEAPSAHDLQIYGIVVTILLCFIVFGGVKMINRVAPAFLIPVLFSVICIWLGMFVAGEDKPTEGFTGLSWETIKDNWSSDYQKTNDAGIPEPDGHVSWNFK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30554g00006 337 Pfam Amino acid permease 111 319 IPR004841 GO:0016020|GO:0055085
Stsc30554g00006 337 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 58 320 IPR004842 GO:0006811|GO:0015377|GO:0016020
Stsc30554g00006 337 MobiDBLite consensus disorder prediction 31 48 - -
Stsc30554g00006 337 Gene3D Amino acid/polyamine transporter I 104 326 - -
Stsc30554g00006 337 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30554g00006 Stsc-Chr30554 42127 48715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30554g00006 106 337 Inorganic Solute Cotransporters AT1G30450 76.395 1.63e-124 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30554g00006 K14427 - gmx:100795205 516.538