Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30544g00007 ATGGCGTCGTCCACCAAGGAACGCGAAAACTTCGTCTACACCGCCAAACTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCAATGAAGAATGTAGCGAAGCTAAACGTGGAGTTGACGGTTGAGGAGCGAAACCTTCTGTCAGTTGGGTACAAGAACGTGGTTGGGGCTCGTAGGGCTTCATGGAGGATTCTCTCCTCCATCGAGCAGAAGGAAGAATCCAAAGGGAACCATGTTAGCGTGAAGCGGATCCAGGAGTATAGGAACAAAGTTGAATCTGAGTTGTCTAATATCTGCTCTGATATCATGACTGTTATTGATGAACACCTCATCCCTTCTTGTTCTGGTGGTGAACCTAGCGTCTTCTTCTATAAGATGAAGGGCGACTATTATCGGTATCTGGCCGAATTCAAGACTGGAGATGACAGAAAGGAGGCTGCTGATCACTCCATGAAAGCATATGAGTCGGCTTCTACTGCTGCAGAAGCTGAGTTACCTCCAACCCATCCCATCAGATTGGGTTTGGCTTTGAACTTCTCTGTTTTCTATTATGAAATTTTGAACTCTCCCGAAAGGGCCTGTCACCTTGCTAAGCAGGCATTTGATGTAGCAATCGCCGAGTTGGATACACTCAGCGAAGAGTCTTACAAAGACAGCACACTGATTATGCAGCTTCTGAGGGACAACCTTACCTTGTGGACCTCTGACATCCCTGAAGATGGAGCTGATGAACAAAAGGCAGAGTCTGCACAAGCTCCGCAAGGTGAAAACTGA 780 0.4744 MASSTKERENFVYTAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEESKGNHVSVKRIQEYRNKVESELSNICSDIMTVIDEHLIPSCSGGEPSVFFYKMKGDYYRYLAEFKTGDDRKEAADHSMKAYESASTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDVAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGADEQKAESAQAPQGEN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30544g00007 259 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Stsc30544g00007 259 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Stsc30544g00007 259 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Stsc30544g00007 259 FunFam 14-3-3 protein epsilon 3 249 - -
Stsc30544g00007 259 PANTHER 14-3-3 PROTEIN 8 239 IPR000308 -
Stsc30544g00007 259 MobiDBLite consensus disorder prediction 238 259 - -
Stsc30544g00007 259 SMART 1433_4 8 249 IPR023410 -
Stsc30544g00007 259 Pfam 14-3-3 protein 15 236 IPR023410 -
Stsc30544g00007 259 Gene3D - 1 250 IPR036815 -
Stsc30544g00007 259 PIRSF 14-3-3 2 250 IPR000308 -
Stsc30544g00007 259 Coils Coil 14 34 - -
Stsc30544g00007 259 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Stsc30544g00007 259 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Stsc30544g00007 259 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Stsc30544g00007 259 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Stsc30544g00007 259 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Stsc30544g00007 259 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30544g00007 Stsc-Chr30544 39773 42022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30544g00007 3 257 14-3-3 family AT2G42590 78.431 2.67e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30544g00007 K06630 - gmx:100807980 459.144