Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30539g00001 ATGAAGAAGGGGGAGGTAGCTTTGTTCACGTTTCCCAATGAGTCTGGTGTTTCACCACCCAACTCCAAGAAGTTTGAGGTGGAGCTGATTTCGTGGATCAAAGTGGTGGATGTTTGCAGAGATGGCGGGATTATCAAGAAAATTATGGAGAAGGGGACTGGGGACGAGCGACCACGTGATCCAGATGAAGTCCTTGTGAAGTATCGGGTGGCACTAGCTGATGGCACTGTTGTTGCTGAAACACTGGATGAAGGAGTTGAATTTCATGTTAAGGATGGTCATCTTTTTCCGGGATTGCCAAGAGTAATCATGACTATGACAAAGGGAGAGAAGGCTCAATTAATTGTTCAACCCCAGTGTATGTCTCCTGGTCTTCTAATTCACCTTTGA 390 0.459 MKKGEVALFTFPNESGVSPPNSKKFEVELISWIKVVDVCRDGGIIKKIMEKGTGDERPRDPDEVLVKYRVALADGTVVAETLDEGVEFHVKDGHLFPGLPRVIMTMTKGEKAQLIVQPQCMSPGLLIHL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30539g00001 129 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 61 119 IPR001179 GO:0003755
Stsc30539g00001 129 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 55 119 IPR001179 GO:0003755
Stsc30539g00001 129 SUPERFAMILY FKBP-like 37 119 - -
Stsc30539g00001 129 Gene3D - 33 122 IPR046357 GO:0003755
Stsc30539g00001 129 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 42 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30539g00001 Stsc-Chr30539 604 4144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30539g00001 1 119 Calmodulin-binding Proteins AT3G25230 51.163 4.43e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30539g00001 K09571 - gmx:100793684 174.866