Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30537g00008 ATGAACCCCAAACCCACACAAGATTTTGGAGGAGGAGTCTACTTATTGCAAGACATGGAATGGGTTGTTATTGCGGTGGGAGTAACAACAATCTGCTTGGTGACGAGTCTGTGTTGGTGGCTTCTTCATGATGAAAACAAGAAGAAGGAGATGAGAAGGGGAAAGATTCCAAAAGGGAGTTTGGGTTGGCCTATAATCGGAGAGACCCTTCATTTCATTTCTTCCGGTTACTCTTCTAAACCTCCACCTCTCACCTTCTTGGAAAAGCGCAAGTCCTTGTATGGGAATGTGTTCAAGACGAACATACTGGGAAGCAATGTGATAGTATCGACGGAGGTGGAGGTAAACAAGGTCATTCTTCTGAACCAAGGCAACATCTTCGTTTCTGCTTATCCCAAATCAATCAGGGAAATCTTCGGCGATTATTCCATACTCCACATGACCGGCACCCTCCACAGGAACATGCATGCTCTCATCATTTCCTTCCTTCGTTCCCCCCACTTCAAGGCTCGCATCACCTCTGACATCGAGCGCTCTGTCAAACATTGCTTGCTCACTTGGAAACACGCCACCCCACACCAACCAATATACGTTCAAGATCAAGTCAAAATGATTACGTTTCCTGTGTTGGTCAAAGTTTTGATGAGCGTTAGTGGTGGTGAAGAGCTCAAGTTGTTGAAGAAAGATTTTCAGGAGTTCGTTAAAGGCTTAATTTGCGTGCCCATCAAGTTTCCAGGAACAAGGCTATACAAATCTTTGAAGGCGAAAGAAAGGATGGTGAAGATAGTGAAGAGGATAATGGAGGAGAGGATGAAGAATACAAGTAGTACAAGTAGAAGTGATGAAGAGAATGATGTAGTGGACGTGATGTTAAGGAATGATTGGAATCCAAAGCCGACGTTGGAAATGATGAGCTCAAACATAATAGAGCTGACTATACCTGGTGAAGAGACCGTTCCTACTGCTATGACCATCGCCATCTTCTTCCTTTCTAACTCCCCTCTTGCTCTTTCCAAACTCATAGAAGAGAACATGGAACTGAAGAGGCACAAGACTAGTACAGATAATAAATATGCATGGACTGATTACATGTCGCTACCCTTTACTCAAAATGTCATAAGTGAAACTCTTAGAATGGCCAATATTGTGAATGGCATTTGGAGAAAAGCACAAAAAGACGTAGAAATTAAAGGGTACCTAATTCCTAAGGGCTGGTGTGTTATGGCATGTCTTACCTCTGTTCACTTAGACTCCAACAACTATGAAAACCCATTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGAGCTGCTGCTAGTAACAATTGTTATGCCCCATTTGGCGGTGGACAGAGATTATGCCCTGGCTGGGAACTCTCTAGGCTAGAACTTGCTATATTCCTTCACCATCTTGTCACTACTTACAGATGGGTGGCCGACAGAGATGAAATACAATATTTTCCAACGGTCAAGATGAGAAGAAAGCTGCCAATAATTAGCGTAGAACCCATTAATGCATGA 1521 0.4313 MNPKPTQDFGGGVYLLQDMEWVVIAVGVTTICLVTSLCWWLLHDENKKKEMRRGKIPKGSLGWPIIGETLHFISSGYSSKPPPLTFLEKRKSLYGNVFKTNILGSNVIVSTEVEVNKVILLNQGNIFVSAYPKSIREIFGDYSILHMTGTLHRNMHALIISFLRSPHFKARITSDIERSVKHCLLTWKHATPHQPIYVQDQVKMITFPVLVKVLMSVSGGEELKLLKKDFQEFVKGLICVPIKFPGTRLYKSLKAKERMVKIVKRIMEERMKNTSSTSRSDEENDVVDVMLRNDWNPKPTLEMMSSNIIELTIPGEETVPTAMTIAIFFLSNSPLALSKLIEENMELKRHKTSTDNKYAWTDYMSLPFTQNVISETLRMANIVNGIWRKAQKDVEIKGYLIPKGWCVMACLTSVHLDSNNYENPFKFDPWRWEKIGAAASNNCYAPFGGGQRLCPGWELSRLELAIFLHHLVTTYRWVADRDEIQYFPTVKMRRKLPIISVEPINA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30537g00008 506 PRINTS E-class P450 group IV signature 454 472 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 PRINTS E-class P450 group IV signature 366 382 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 PRINTS E-class P450 group IV signature 415 433 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 PRINTS E-class P450 group IV signature 85 108 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 PRINTS E-class P450 group IV signature 438 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 SUPERFAMILY Cytochrome P450 52 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 Pfam Cytochrome P450 57 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 PANTHER CYTOCHROME P450 26 54 478 - -
Stsc30537g00008 506 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 46 503 - -
Stsc30537g00008 506 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Stsc30537g00008 506 Gene3D Cytochrome P450 45 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30537g00008 506 CDD CYP90-like 90 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30537g00008 Stsc-Chr30537 48647 51837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30537g00008 42 476 Cytochrome P450 AT3G13730 49.083 5.10e-153 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30537g00008 K12637 - gmx:100799030 669.077