Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30537g00004 ATGTTCTCCAAAAACAACAAGATGCATGAGTACATCAGCCCTGGCCTTAGCACAAAGAAGGTCATTGATCAGTATCAGAAGACTTTGGGGGATGTCGATCTCTGGCATTCCCACTATGAGAAAATGCTTGACAACTTGAAGAAACTCAAAGATATTAATAATAAGCTCAGAAGACAAATCAGGAATCGGATAGGGGAGGGTAATCTGGATATGGACGATCTGAGCTTTCAGCAACTGCGTACTCTTGAAGAAGATATGGTTTCTGCCATTGCCAAAATACGCGAACGAAAGTTCCATGTGATCAAAAATCGGACTGAAACCTGTAGGAAAAAGGTGAGGAGCTTGGAGCAGATGAACGGAAATCTCCTTCTTGAACTTGAAAAGTGTGTGATCCATCCACAATTTGTGTTGCACGATGAAGGAGGAGAGCAGGAATCAGCAGTTGCACTTGCCAATGGAGCCTCCAACCTCTATGCATTCTGCCACCACCACCATACTACTCATCTCAATCATCACCTTCATAACCACCATGCACCACCATCAGAACCCTTCAAAACTGATGATCTCCGCCTCGCTTAA 579 0.4404 MFSKNNKMHEYISPGLSTKKVIDQYQKTLGDVDLWHSHYEKMLDNLKKLKDINNKLRRQIRNRIGEGNLDMDDLSFQQLRTLEEDMVSAIAKIRERKFHVIKNRTETCRKKVRSLEQMNGNLLLELEKCVIHPQFVLHDEGGEQESAVALANGASNLYAFCHHHHTTHLNHHLHNHHAPPSEPFKTDDLRLA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30537g00004 192 MobiDBLite consensus disorder prediction 175 192 - -
Stsc30537g00004 192 SUPERFAMILY SRF-like 1 50 IPR036879 GO:0003677|GO:0046983
Stsc30537g00004 192 Pfam K-box region 36 126 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc30537g00004 192 MobiDBLite consensus disorder prediction 171 192 - -
Stsc30537g00004 192 Coils Coil 39 59 - -
Stsc30537g00004 192 ProSiteProfiles K-box domain profile. 39 132 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30537g00004 Stsc-Chr30537 27380 28927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30537g00004 1 186 MADS-box Gene Family AT3G54340 40.957 2.40e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30537g00004 K09264 - gmx:100784496 280.411