Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30536g00007 ATGCATAGGAAGGAGCGCATGATGGGAATGATGAGAATATTCACTCACACGGAACACATGGACTTGTTACCAGTAGGTCCTCGAACTTCTTCATCACCGGATTATATCACAGGGATTACTTTAGGAGCATCAATGAGTTTAGAAACAATAAGACCCCTAGTTGGTGCCTTGACTTTTCATCAGTTCTTTGAGGGTATGGGACTTGGAAGTTGCATAACTCAGGCAAAATTTAGAAGACTATCTGTGATAATCATGGGATTATTTTTCTCTCTAACTACACCAGTAGGAATTGCAATCGGCATAGGAATATCATGTGTTTATGATGATAATAGTCCAACTGCCTTTATTGTGGAAGGGGTTTTCAACGCAGCTTCAACTGGAATATTAATCTATATGGCACTTGTAGATCTTCTTGCGGCTGATTTTATGAATCCGAGGATGTAG 444 0.3986 MHRKERMMGMMRIFTHTEHMDLLPVGPRTSSSPDYITGITLGASMSLETIRPLVGALTFHQFFEGMGLGSCITQAKFRRLSVIIMGLFFSLTTPVGIAIGIGISCVYDDNSPTAFIVEGVFNAASTGILIYMALVDLLAADFMNPRM 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30536g00007 147 PANTHER ZINC/IRON TRANSPORTER 36 143 - -
Stsc30536g00007 147 Pfam ZIP Zinc transporter 36 146 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30536g00007 Stsc-Chr30536 29518 30521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30536g00007 36 147 Inorganic Solute Cotransporters AT2G32270 62.500 4.30e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30536g00007 K14709 - gmx:100789557 184.111