Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30535g00009 ATGGAAGCATGGACAATCATAATGTTGAGCATCCCTCTTCTGTATCTGATCATCAAAATAATAACATTGAGAGTCGTGCATGTTAAAAGCCCATCACTGCCACCAGGTCCCATGCACATTCCACTTATAACCAACATTATTTGCCTCACAACATATTCTTCATTCTCAAAACTACGCCCACTACTCCCACGCCTCCACGCCAAACACGGCCCTATCATCACACTCCCAATCTGGTCCGGGCCCCACATCTTCATCGCCGATGCCTCACTCGCTCACCAAGCTTTGCTCCAAAACGCTGCCGTTTTCGCCAACCGCCCCTACAAAACTCTTTCCACCATTCACCGCCAACTTAACATCACCTCCTCCCCGTACGGCCCAACATGGCGCCTCCTCCGCCGCAACCTTACCTCCTATATCCTCCAACCTTCTTTTTCCTCCCTCCGCAAATCTGTCTTGCGCGATCTCCTCACCCGTCTCAAATTATCAATAACCGCTTCTTCTTCTTCTTCCTCTTCCTCCATTAGAGTCGATGATCATGTTCACGACGCCGTGCTCTCCATGCTGGTCTTCATGTGTTTCGGCGACGAGATCCAAGAAAATAAAATCCATCACATGAAACGCATCCAGCGCGCCCTCATCTCTGGCTTTAACAGGTTCAGTGTGCTGAATTTCTTGCCACGCGTGGTGTATCGAGTGGTATTCCCACAACGTTGCAAGGAGTATTTGCACCTCAGGGAACAACAGAAGCTCGCCTTTAAGGAGGTCATGGAAGAGAGGAGATTAAGCAGGAAGAACAAAGATGATAAGACTTTTGTTTTTTACGTGGATACTTTGTTGGAGTTGGTGTTACCAGCGGAGAACAATCGTAAGCTTGAGGAGGACGAAGTGATTAGCTTGTGTTCGGAGTTTCTAAGCGCCGGCACCGACACAACATCGACGGCATTGGAGTGGATTGTGGCGAACTTGGTGAAATATCCACTCATTCAAACGAGGCTTGCTGATGAAATTGCAGAGGTGGTGCGTGAAAGAGGAGGAAACGATGATGAAGTGGAAGAGGAAGATCTCGAGAAGCTGCCATATCTGAAAGCGGTGATACTCGAAGGATTAAGACGTCACCCGCCTTCGCATTTTTTGCTGCCGCATGCGGTTACTGAGGATACGGTTCTGAATGGTTACTTGATTCCTAAGAAAGCGACGGTGAATTTCACGGTGGCAGAGATGGGGTGGGACCCCAAGGTGTGGGAGGATCCCATGGGGTTCAAACCGGAGAGGTTCTTGAACGCAGAAGAATTTGGTGCGAGTGGGAAGAAAGAAATTAACAATAAGATGATGCCGTTTGGAGCGGGTAGAAGGATGTGTCCTGCTTATGGGTTGGCCATGCTGCATTTGGAATATTTGGTTGCTAATTTGGTTTTGGCCTTCAAATGGAGCACCGTCCACGGCGGAGATGCTCTTGATTTATCGGAGAAACAAGGATTTACTACCGCCATGAAGCATCCATTACATGCACGCATTTCCCCTAGGTTCTAA 1530 0.485 MEAWTIIMLSIPLLYLIIKIITLRVVHVKSPSLPPGPMHIPLITNIICLTTYSSFSKLRPLLPRLHAKHGPIITLPIWSGPHIFIADASLAHQALLQNAAVFANRPYKTLSTIHRQLNITSSPYGPTWRLLRRNLTSYILQPSFSSLRKSVLRDLLTRLKLSITASSSSSSSSIRVDDHVHDAVLSMLVFMCFGDEIQENKIHHMKRIQRALISGFNRFSVLNFLPRVVYRVVFPQRCKEYLHLREQQKLAFKEVMEERRLSRKNKDDKTFVFYVDTLLELVLPAENNRKLEEDEVISLCSEFLSAGTDTTSTALEWIVANLVKYPLIQTRLADEIAEVVRERGGNDDEVEEEDLEKLPYLKAVILEGLRRHPPSHFLLPHAVTEDTVLNGYLIPKKATVNFTVAEMGWDPKVWEDPMGFKPERFLNAEEFGASGKKEINNKMMPFGAGRRMCPAYGLAMLHLEYLVANLVLAFKWSTVHGGDALDLSEKQGFTTAMKHPLHARISPRF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30535g00009 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 Pfam Cytochrome P450 34 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 CDD CYP77_89 68 502 - -
Stsc30535g00009 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 500 - -
Stsc30535g00009 509 Gene3D Cytochrome P450 27 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 SUPERFAMILY Cytochrome P450 32 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Stsc30535g00009 509 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30535g00009 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30535g00009 Stsc-Chr30535 47125 48654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30535g00009 1 508 Cytochrome P450 AT1G64940 49.524 8.33e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30535g00009 K24184 - gmx:100792037 521.931