Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30534g00004 ATGGGGAAGGGAAGAAGTCCTGGTAAATGGTTCAAGAATCTTATCTTGGGAAGGAAATCATCATCAAAGTCTAATTCCTCAAAGAAAAAGGATATTTTTAAACTAAATAACAATGAAGTGCTGGGCTCTTCTGAGGCGGTGTCTGATCCAACTGTGGATTCTTTGGTGATATCAGCGCCAATTTCTGGAGCTAATGCTAATAACGGAGTACTTTCAGAAAAGAACAAGTCATCTAATGAAAGGGATATCCTTTCAACCGGAGGTGGTGAGTCACGTGCACAAGCTGATGGTGCTTTTGGAACTCAAGAGGATCATGAGAATGTCAGGCTTACAGAAGCTGCTATAAAAGTTCAGGCTGCTTGTAGAGGCTATCAGGCTCGTCGGACATTTCAAATGCTCAAAGGTATCATACAACTTCAAGCTCTTATCCGTGGTCAATTGGTTAGAAAACAAGCTGTTGCTGCTTTATACTGCGTGAAGCGAATAGTTAAGTTTCAAGCGTTGGCACGGGGTTACATTGTTAGACGCTCTGAGATTGGGCTTGAAGTCCTTAAAATTCTTAAGGATACCCAACATTCAAATTCTATTCAAGTGGCTACATCTACCCAGGCTGAGAAGCTTCCAGAAAGTGTCTTTGTTTGCAAGCTTCTGGCTTCATCGGGCTCTGCAGTTCCATCATCTCTCAATTGTTATCCTAACGAACCTAACTTAGCTTGGAAATGGCTTGACAGTTGGACAAGGCTCTATTGGGCCCCTCCTCAGGTTGTGAAGAAGAAACTTGACCCGGTCTCTGGTGAGAAAAGTGGCAGTAATCAAGCAGTTAAAAGGAAGCAAGTCAAAAGAACTACACAGAAATCCCCTACACTGAAAGCTGATGATGGCACAATTTCTGGTTCTAACAAATATAAACAGCGTCCGAAAAAGGATTTGAACAGCCCATCAGTTTCAGCTCAGGAACATGTGCAAAAGGAAGTAGAGAAAAATAGTTCGAAAAAAACTCGTCTGCAGAATGTTTCAGATAGATCTGAGGCGGTTACTGAAAAAAGAAAACAAAGTACTAAAAGAAGTTCAGAGCATACCGTCGCTGATGTTTCAGAGCAGGGGTCAAGTGCTTCGTCGGAGAAAAGGAAAGATTTGGCACTGTCAAAGTCTAAAGAGTCTGATGCAAAGAAAAATCTTGGTCAGCCAGAAGAAGACAATCATGATACTGAGCTGAATAGTCTCAAGAAATCTTGTGTGGAGAATGTTGTAGATAGATCTGAGAGTGTTAATGAGGAACAAAAGCACAGCAGTATAAAAGTTTCAGATGAAACTGTCACTGATGTTTCAGATCCGGGCACAAGTGCCTCTCCCGAGAACAAGAAAGATTTGACAGTGTCAGAGTCTGAAGGATCCGATACTGAGAAATGTCTTGGGCAAAAAGCAGACAATGAGCCTCATAGTCCTGAAAAAATTGTCAGTCAGAATGCTGAAGATAGATCTGACAGTGTCAATGAGAAAAGAAAACACAGCACTATAAAAGATTCAGATCATACTGTTATTGATGTTTTGGAGCAGGGCACAAGTGTGACACCAGAGAAAAAGAAAGATTTGGCAGTGTCAAAGGAATCTGATCCTGAAAAAATTGTTGGACAACAAGAAGATAAACATGTTAAGGGGAATAGTTACTCTAAAAAAGCTCATGTTCAGACTGTTGCAGATAGTTCTGAGATTGTCCATGAGAAAAGAAAAAACAGCACTAAGAAAATTTCAGACCATACTGTTGCTGATGTATCAGAGCAGGGCACAAGTGCCTCTTCAGAGAAAAAGAAAGCATTAAAAGTGTCCAAGTCCAAAGAGTCCGATCCCGCAAAAAGTACTGGACAGAGAGCAGGAGGCAAGCATGATATTGAGCCACATAATGATCTTATTGCTGTCTCGCAGACTACTTTGACAAATGGTATAAATGCAGAAACTCAAGGAACTGGTGAGGACTTGAATGGTGGTGATGGTTATATTGGTAACAATTGCCAGAGAAGAGCTTCACTTCCTGCTAATTTCAGTGATCAGGATAGTGAGTTGCACAGCACGCCACAACTACCCAGTTATATGGCTCCAACTGAATCGGCAAAGGCTAAGCTACGAGCACAAGGCTCCCCTAGGTTTGCCGCTGATTTGTTAGACAAAAATGCTATGACCAGGAGGCATTCGCTTTCATCTTCGTTTAATAGCAAGTCAGGTTCATTTTCACCGAGAGCAGAAAGATTGGTAGCCTTGAGCAGCAAAGGAGCAATAAGGAGTGATCGATCTCTGTCGTCTTCAAGGGACGTGACTGATAAGGTGATCCAACCTCAATGGAGAAGGTGA 2346 0.419 MGKGRSPGKWFKNLILGRKSSSKSNSSKKKDIFKLNNNEVLGSSEAVSDPTVDSLVISAPISGANANNGVLSEKNKSSNERDILSTGGGESRAQADGAFGTQEDHENVRLTEAAIKVQAACRGYQARRTFQMLKGIIQLQALIRGQLVRKQAVAALYCVKRIVKFQALARGYIVRRSEIGLEVLKILKDTQHSNSIQVATSTQAEKLPESVFVCKLLASSGSAVPSSLNCYPNEPNLAWKWLDSWTRLYWAPPQVVKKKLDPVSGEKSGSNQAVKRKQVKRTTQKSPTLKADDGTISGSNKYKQRPKKDLNSPSVSAQEHVQKEVEKNSSKKTRLQNVSDRSEAVTEKRKQSTKRSSEHTVADVSEQGSSASSEKRKDLALSKSKESDAKKNLGQPEEDNHDTELNSLKKSCVENVVDRSESVNEEQKHSSIKVSDETVTDVSDPGTSASPENKKDLTVSESEGSDTEKCLGQKADNEPHSPEKIVSQNAEDRSDSVNEKRKHSTIKDSDHTVIDVLEQGTSVTPEKKKDLAVSKESDPEKIVGQQEDKHVKGNSYSKKAHVQTVADSSEIVHEKRKNSTKKISDHTVADVSEQGTSASSEKKKALKVSKSKESDPAKSTGQRAGGKHDIEPHNDLIAVSQTTLTNGINAETQGTGEDLNGGDGYIGNNCQRRASLPANFSDQDSELHSTPQLPSYMAPTESAKAKLRAQGSPRFAADLLDKNAMTRRHSLSSSFNSKSGSFSPRAERLVALSSKGAIRSDRSLSSSRDVTDKVIQPQWRR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 370 435 - -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 260 632 - -
Stsc30534g00004 781 ProSiteProfiles IQ motif profile. 160 185 IPR000048 GO:0005515
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 1 32 - -
Stsc30534g00004 781 Pfam Protein of unknown function (DUF4005) 683 760 IPR025064 -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 456 514 - -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 320 361 - -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 522 555 - -
Stsc30534g00004 781 PANTHER IQ-DOMAIN 5-RELATED 1 737 - -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 436 455 - -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 568 588 - -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 68 102 - -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 603 632 - -
Stsc30534g00004 781 SMART iq_5 132 153 IPR000048 GO:0005515
Stsc30534g00004 781 SMART iq_5 109 131 IPR000048 GO:0005515
Stsc30534g00004 781 SMART iq_5 157 179 IPR000048 GO:0005515
Stsc30534g00004 781 ProSiteProfiles IQ motif profile. 132 161 IPR000048 GO:0005515
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 758 773 - -
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 757 781 - -
Stsc30534g00004 781 Pfam IQ calmodulin-binding motif 111 131 IPR000048 GO:0005515
Stsc30534g00004 781 Pfam IQ calmodulin-binding motif 134 151 IPR000048 GO:0005515
Stsc30534g00004 781 Pfam IQ calmodulin-binding motif 160 176 IPR000048 GO:0005515
Stsc30534g00004 781 MobiDBLite consensus disorder prediction 284 301 - -
Stsc30534g00004 781 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30534g00004 Stsc-Chr30534 20391 25755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30534g00004 650 781 IQD Protein Family AT1G14380 41.096 3.14e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30534g00004 - - aip:107643525 1243.41