Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30534g00001 ATGGGTTTGGGTGCTGAGAATGGTAAGGTGGTAGATTCTTGGGATGTGTGTAAATCAAAGGGGAAGAAGAAGAAGAAGAGTAAGGACTTGAAGCAGAAGGAAGGTGAGGTAGTGGGGGTGGAGGAAGATGAAGAGTTTGAGAGAGAGACTGGGTGTTGGGTTAGGCTAAGGTTCATGGGTAGCTGCATTTCTTCAAGACCCAAAGTTGATAACTCAGTCAGTGGCACCACCACTCATGATGCTGAAAGTAAATCAACTAGTGATACAAGTAGAGACCAGCCAAGTGAACCAACAGCTCCAGTAGTCTCATCGACAACTACAACTACTAGCAATGCAAGCAGTTCATCAACTTCTAAACTCGAAGAGGAGCTTAAAGTTGCCTCCAGGCTAAGAAAGTTCTCTTTCAATGATCTTAAGTTGGCAACGAGAAATTTCCGGCCTGAGAGTCTTCTTGGCGAAGGTGGGTTTGGTTGCGTATTCAAGGGATGGGTTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACCGTTGCCGTAAAAACCCTCAACCATGATGGGCTCCAAGGCCATAAAGAATGGCTGGCTGAAGTAAACTTTCTTGGTGATCTAGTCCATCCACACCTTGTTAAGCTTATAGGGTACTGCATTGAAGATGATCAAAGTTCTCATCTAGAAATCATATCATATGTAGGATCCATGCCTCTTCCATGGTCCGTTAGGTTGAAAATTGCACTAGGAGCAGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAACGACCAGTAATATATAGAGATTTTAAAACTTCAAATATATTATTAGATGCAGAATACAACGCCAAGCTCTCAGACTTTGGACTCGCCAAAGATGGTCCAGAAGGAGATAAAACCCATGTGTCTACCCGAGTGATGGGAACTTATGGTTATGCCGCACCGGAATATGTCATGACAGGTCATCTTACATCAAGAAGTGATGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCTATGGACAAACACCGTCCCAATGGCGAACATAATCTTGTGGAATGGGCTCGGCCGCATCTGGGAGAGAAGAGAAGGTTCTATAGGCTGTTGGACCCTCGCCTTGAAGGCCATTTCTCGATAAAAGGAGCTCAGAAAGCCGCCCAAATTGCCGCTCGCTGCCTTAGTAGAGATCCAAAAGCGAGACCTCTAATGAGTGAAGTTGTAGAAGATCTAAAGCCTCTGCTAAGTCTTAGGGACATGGCAAGCTCTTCATATTACTTCCAGACGATGCAAGCTGACCGCTTTAGCCCTAGCCCAAATACCCGAAATGGTCGGACACAAGGAGTGCTCCTTGGCCGGAATGGGCAGAGGAGTCTTTCAATACCCAATGGTACTCATGCTTCTCCATATCACCATCAGTTTCAACAATCACCAAAACCTAATGGCAAAGGATAG 1470 0.4537 MGLGAENGKVVDSWDVCKSKGKKKKKSKDLKQKEGEVVGVEEDEEFERETGCWVRLRFMGSCISSRPKVDNSVSGTTTHDAESKSTSDTSRDQPSEPTAPVVSSTTTTTSNASSSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPHLVKLIGYCIEDDQSSHLEIISYVGSMPLPWSVRLKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGEKRRFYRLLDPRLEGHFSIKGAQKAAQIAARCLSRDPKARPLMSEVVEDLKPLLSLRDMASSSYYFQTMQADRFSPSPNTRNGRTQGVLLGRNGQRSLSIPNGTHASPYHHQFQQSPKPNGKG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30534g00001 489 SUPERFAMILY Protein kinase-like (PK-like) 123 416 IPR011009 -
Stsc30534g00001 489 PANTHER OS01G0588500 PROTEIN-RELATED 106 418 - -
Stsc30534g00001 489 ProSitePatterns Protein kinases ATP-binding region signature. 151 183 IPR017441 GO:0005524
Stsc30534g00001 489 MobiDBLite consensus disorder prediction 460 489 - -
Stsc30534g00001 489 MobiDBLite consensus disorder prediction 67 83 - -
Stsc30534g00001 489 ProSiteProfiles Protein kinase domain profile. 145 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30534g00001 489 MobiDBLite consensus disorder prediction 90 121 - -
Stsc30534g00001 489 Pfam Protein kinase domain 148 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30534g00001 489 MobiDBLite consensus disorder prediction 67 121 - -
Stsc30534g00001 489 Gene3D Phosphorylase Kinase; domain 1 104 225 - -
Stsc30534g00001 489 FunFam Probable serine/threonine-protein kinase PBL8 225 437 - -
Stsc30534g00001 489 MobiDBLite consensus disorder prediction 18 48 - -
Stsc30534g00001 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Stsc30534g00001 489 FunFam Serine/threonine-protein kinase BIK1 112 230 - -
Stsc30534g00001 489 Gene3D Transferase(Phosphotransferase) domain 1 226 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30534g00001 Stsc-Chr30534 1623 4884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30534g00001 131 416 Glycoside Hydrolase AT3G07070 54.667 4.95e-105 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc30534g00001 Pkinase 4.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30534g00001 - - gmx:100787151 755.747