Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30523g00001 ATGGGAGGGGCTATTCTGTCGGAGCTCGCGACGGAGATAGTGATTCCGGTATGCGCCGTCGTCGGGATCGTGTTCTCACTGGTGCAGTGGTTCCTCGTTTCGAAGGTGAAGCTCACGCCGCACGCAACGTCGTCTTCGAGTGGTAACAACAACAACAACAACAACGGGAAGAACGGTTACGGAGATTACCTGATCGAAGAGGAGGAAGGAATCAACGACCACAGCGTCGTGGTCAAGTGTGCCGACATTCAAAACGCCATCTCCGAAGGTGCCACGTCCTTTCTTTTCACTGAATATCAGTATGTGGGAATCTTCATGGTTGCTTTTGCGGTTCTGATCTTCCTTTTCCTGGGCTCCGTGGAAAGCTTCAGCACCAAGAGCCAGGCTTGCACATATGACAAGACCAAGATGTGCAAGCCAGCCCTTGCAACTGCATTGTTCAGCACTGTATCATTTTTGCTCGGTGGTTTAACATCGGTCCTCTCTGGTTACCTTGGGATGAAAATTGCAACCTATGCCAATGCCAGGACAACCTTGGAAGCAAGAAAGGGAGTTGGGAAGGCTTTTATTACTGCATTCAGGTCTGGAGCAGTGATGGGTTTTCTTCTTGCAGCAAATGGTCTTTTGGTCCTCTACATTGCCATTAATCTCTTCAAGATATATTATGGTGATGATTGGGAAGGTCTTTTTGAGGCTATAACTGGTTATGGCTTGGGTGGATCTTCCATGGCTTTGTTTGGGAGAGTTGGTGGTGGTATCTATACCAAGGCTGCTGATGTTGGTGCTGACCTTGTAGGAAAAGTTGAAAGAAATATCCCTGAGGATGATCCAAGAAACCCTGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGAGATATTGCTGGGATGGGTTCTGATCTATTTGGCTCATATGCTGAATCATCTTGTGCTGCCCTCGTTGTTGCTTCCATTTCCTCATTTGGAATCAACCACGACTTCACTGCCATGTTGTATCCCCTACTTGTCAGTTCTGTGGGCATTCTTGTCTGTTTGATTACTACTCTCTTCGCAACCGATTTCTTTGAGATCAAGGCTGTCAAGGAAATCGAACCAGCATTGAAAAAGCAGCTTATCATTTCTACAGCACTCATGACTGTTGGAATTGCAATTATTAGTTGGCTTGCTCTCCCATCATCCTTCACTATTTTCAACTTCGGAGCACAGAAAGAAGTTAAGAGCTGGCAGTTATTCCTATGTGTGGCTGTTGGACTCTGGGCTGGACTTATTATAGGGTTTGTTACAGAATATTATACAAGCAATGCTTACAGCCCTGTACAAGATGTTGCTGATTCCTGCCGGACTGGAGCTGCAACCAATGTCATCTTTGGCCTTGCTCTAGGATACAAGTCTGTCATTGTTCCTATTTTTGCCATTGCAATAAGTATCTTCGTAAGTTTCAGTTTTGCTGCAATGTATGGAATTGCTGTGGCTGCCCTTGGAATGCTTAGTACCATTGCTACTGGATTGGCTATTGATGCCTATGGACCTATCAGTGACAATGCTGGAGGCATTGCTGAAATGGCTGGAATGAGCCATCGTATCCGTGAGAGAACTGATGCACTTGATGCTGCCGGCAACACAACTGCTGCCATTGGCAAGGGATTTGCTATTGGATCTGCAGCTCTGGTATCTTTGGCCCTATTCGGTGCCTTTGTCAGCAGGGCAGGAATTTCAACTGTTGATGTCTTGACTCCCAAGGTCTTTATTGGACTCTTAGTCGGCGCCATGCTCCCCTACTGGTTTTCTGCCATGACCATGAAAAGTGTTGGAAGTGCAGCTTTGAAGATGGTTGAGGAAGTACGTAGGCAGTTCAACACCATTCCAGGACTCATGGAGGGTCACGCCAAACCCGACTATGCCACATGCGTCAAGATTTCCACCGACGCATCCATCAAGGAGATGATTCCTCCAGGTGCCCTTGTCATGCTTACACCACTCATTGTCGGTACCTTGTTCGGTGTGGAAACACTCTCAGGCGTTCTTGCAGGTGCCCTTGTTTCTGGTGTGCAGATTGCAATATCAGCATCAAACACTGGTGGTGCCTGGGATAATGCTAAGAAGTACATTGAGGCTGGTGCATCTGAGCATGCTAGGACCTTGGGACCAAAGGGATCCGATCCACACAAGGCAGCTGTTATCGGTGACACCATTGGTGACCCTTTGAAGGACACTTCAGGGCCTTCACTGAATATCCTTATTAAGCTCATGGCAGTGGAGTCACTCGTCTTTGCTCCATTTTTTGCCACCCATGGCGGCCTTCTTTTCAAGCTCTTTTGA 2319 0.4722 MGGAILSELATEIVIPVCAVVGIVFSLVQWFLVSKVKLTPHATSSSSGNNNNNNNGKNGYGDYLIEEEEGINDHSVVVKCADIQNAISEGATSFLFTEYQYVGIFMVAFAVLIFLFLGSVESFSTKSQACTYDKTKMCKPALATALFSTVSFLLGGLTSVLSGYLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLVSSVGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTALMTVGIAIISWLALPSSFTIFNFGAQKEVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIVPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLFGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKLF 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30523g00001 772 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc30523g00001 772 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc30523g00001 772 Pfam Inorganic H+ pyrophosphatase 43 757 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc30523g00001 772 NCBIfam V-type H(+)-translocating pyrophosphatase 10 767 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc30523g00001 772 PIRSF H+-PPtase 9 770 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc30523g00001 772 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30523g00001 Stsc-Chr30523 6886 11127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30523g00001 4 635 Primary Pumps ATPases AT1G15690 88.133 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30523g00001 K23025 - gmx:100803691 1398.65