Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30522g00002 ATGCTGCTAGTGTGCAAGCGTGTGCTTGATGCTGTTGAGAAGATGTTTTCTCAGGGTATACCCAATGCTCAAGTGGATAATAAATTGCAAGAAATAGTTAGCCATGCCGTAGAGCTCCTTGCAGAGCTTTGGAAACAGGCCGGTTGCTATCCCAATGCAATATCTGCATATAGGAATGCCCTTCTTAGTCAATGGAACGTTGATAATGATTGCTGTGCAATAATTCAGAAAGCATTTGCTATGTTTTTGCTGAATAGTGGGGTGGAGGCAAATCCTCCCAGTTTGGCAGTTCAAACTGAAGGCTCATATGTACCTAAAAATAATATGAAAGAGGCAATTCTGCTTCTAGTGATTCTTCAAGGAGAAGATGATGTGGAGGCAGATTACAAAATGAAGAATGCTAGTGAGCATTGGTTTTAA 420 0.4095 MLLVCKRVLDAVEKMFSQGIPNAQVDNKLQEIVSHAVELLAELWKQAGCYPNAISAYRNALLSQWNVDNDCCAIIQKAFAMFLLNSGVEANPPSLAVQTEGSYVPKNNMKEAILLLVILQGEDDVEADYKMKNASEHWF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30522g00002 139 PANTHER PROTEIN NPG1 5 119 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30522g00002 Stsc-Chr30522 9852 10348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30522g00002 5 112 Calmodulin-binding Proteins AT2G43040 75.000 2.71e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30522g00002 K21843 - gmx:100811897 194.897