Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3051g00002 ATGGTTCCTACAAAGAAGGAAAAACTGTTCACAACCACTATAGACAACCAACAAAGTATCCGTTTCCCTATCTATGAGGGACAGAGATTAATGGCAAGCGACAACAATTTGCTGGGAAGCTTCGCTCTGGAAATTCCTCCGACGCGTCCCCGCGGAGAACCGAATATTACTGTGTGCTTTGAGATAGATTCTAATGGTATCTTACAAGTATCGGCGGAGGAGAAAGCAACAGGGATGATAAAGAAGGTGTCTGTAGAGAGCAACAAAGGAAGATTGACGAGGGAAGAAGTTGAGAGGATGGTGAAAGATGCTGAGAAGTACAAGGCTGAAGATGAAGAACACAGGAAGAAAGCTGAAGCAAGAAACAACTTGGCGAATCTTGCTTACAATATGAGGAATGTGGTAGAACATGAAGGCATTGGTTCAGAGATATCTGCACAAGACAAGGAAAGAATCAACAACGCTGTTGATTATGCCTTGAAATGGGTTGATGAGAGTGATTTTGCAACGCTGGATGAGATTAACGAGGAAGGGAAACGTCTTTCAAGTGTCTTTAATTCTATTAATTTGAAGATGAATCACAAAATTAGTGTAAGCACTACCGCTGGCGTGATTTCTGCTGTGTGTTCTTTACTCCAACTATTCTCCCAATAA 654 0.419 MVPTKKEKLFTTTIDNQQSIRFPIYEGQRLMASDNNLLGSFALEIPPTRPRGEPNITVCFEIDSNGILQVSAEEKATGMIKKVSVESNKGRLTREEVERMVKDAEKYKAEDEEHRKKAEARNNLANLAYNMRNVVEHEGIGSEISAQDKERINNAVDYALKWVDESDFATLDEINEEGKRLSSVFNSINLKMNHKISVSTTAGVISAVCSLLQLFSQ 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3051g00002 217 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 120 IPR029047 -
Stsc3051g00002 217 Coils Coil 97 121 - -
Stsc3051g00002 217 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 124 IPR029047 -
Stsc3051g00002 217 Gene3D - 121 204 IPR029048 -
Stsc3051g00002 217 Pfam Hsp70 protein 2 192 IPR013126 GO:0005524|GO:0140662
Stsc3051g00002 217 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 119 196 IPR029048 -
Stsc3051g00002 217 PANTHER HEAT SHOCK PROTEIN 70KDA 2 156 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3051g00002 Stsc-Chr3051 4405 5058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3051g00002 2 192 Calmodulin-binding Proteins AT3G12580 51.832 7.89e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3051g00002 K03283 - tcc:18586117 214.927