Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30518g00003 ATGGAGGACTTGCTTCGAGCCGCGGCGGATTTGAGGAGTGAGAGCTTTAGTAGCAGCCTATACAAGGTGAAGCTTGTGGAGAATGGGGCTCACTATGCTGTGAAGAGGTTAAAGAATGTTCAAGCTTCTAGTGATGATGAGTTTGGAGAAACTTTGAAGAAGATAAGCAAGTTGAAGCATCCAAATATTCTTCCACTTGTTGGTTACCGTTCTACTAATGAAGAAAGACTTGTCATCTACAAATATCAAAGCAATGGAAGCCTCCTCAATCTCTTAAATGATTACATAGCAGGTAGGAAACATTTCCCATGGAAATTGCGTCTCTCTATAGCATGTGGAATTGCAAGGGGTATGGCCTTCATATATAGGAAGAAGTTGAATAACAATTACAAAGGGGAACATGAAGAAGAAGATTCCATTATTCCTCATGGGAATCTTAAGCCATCAAACATACTCCTCAATGAAAACAATGAACCACTCATAAGTGAACATGGCCTAACAAAATTCATGGATCCAAATAGGTCAGGGTTTCTCCTCTCGTCTCAGGGATACACCGCGCCGGAAAAATGCCTTTCAGAAAAAGCAGATGCCTATAGTTTTGGCGTTATCTTACTCGAGTTACTAACCGGAAAGAGCATAGAGAAGAGTCGGATCGATCTCGCGAGATGGGTGAGGTCGATGGTGAGGGAGGAATGGACCGGCGAGGTGTTCGATAAAGAGGTTAGGGCAAACGAGCATCAATGGGCTTTTCCCGTGTTGAATGTTGCCCTAACTTGTGTTTCAAGGTTCCAAGAAAATAGGCCAACCATGGGAGAGATTTTAGAGAGGATTGAGGAGGTTATGATTGAGCAAGAACAACAAGAACAACGAATTTCCTCAAAGTGTTGCTCCAATGGATCTAAAGTAGATTGTTGTCCATTTCACAATATTATTCCTGATACATGGGATTCACCAGGATCAAATTATTGA 969 0.42 MEDLLRAAADLRSESFSSSLYKVKLVENGAHYAVKRLKNVQASSDDEFGETLKKISKLKHPNILPLVGYRSTNEERLVIYKYQSNGSLLNLLNDYIAGRKHFPWKLRLSIACGIARGMAFIYRKKLNNNYKGEHEEEDSIIPHGNLKPSNILLNENNEPLISEHGLTKFMDPNRSGFLLSSQGYTAPEKCLSEKADAYSFGVILLELLTGKSIEKSRIDLARWVRSMVREEWTGEVFDKEVRANEHQWAFPVLNVALTCVSRFQENRPTMGEILERIEEVMIEQEQQEQRISSKCCSNGSKVDCCPFHNIIPDTWDSPGSNY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30518g00003 322 ProSiteProfiles Protein kinase domain profile. 5 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30518g00003 322 Pfam Protein kinase domain 18 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30518g00003 322 Gene3D Phosphorylase Kinase; domain 1 8 82 - -
Stsc30518g00003 322 Gene3D Transferase(Phosphotransferase) domain 1 84 302 - -
Stsc30518g00003 322 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 286 IPR046959 -
Stsc30518g00003 322 Coils Coil 270 294 - -
Stsc30518g00003 322 SUPERFAMILY Protein kinase-like (PK-like) 19 287 IPR011009 -
Stsc30518g00003 322 PIRSF ILK 10 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30518g00003 Stsc-Chr30518 26575 28023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30518g00003 1 284 Receptor kinase-like Gene Family AT2G36570 38.264 3.30e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc30518g00003 Pkinase 5.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30518g00003 - - vra:106763201 468.774