Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30518g00002 ATGCCAAGTGTTAATCCTGACCCGTGTGACAAAGATTCTGAGCCCTTTGTTGAGGTTGACCCTACTGGTCGCTATGGTAGATACACAGAGCTATTAGGATCTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGACCAAGAAGAAGGCATAGAAGTTGCATGGAACCAAGTGAAGCTGAGAAATTTATGTGATGACCCTGCCATGGTGGATAGGCTTTACTCTGAGGTGAGGCTTCTGAGAAGCCTGGCTCACAAGAACATCATTGCACTTTACAGTGTTTGGAGGGATGAGAACAAGAACACACTGAATTTCATCACTGAGGTTTGCACAAGTGGGAATCTGAGGGAGTATAGGAAGAAGCATAAGCATGTTTCCATGAAGGCACTTAAGAAGTGGTCAAAGCAGATTCTCAGAGGGTTGAATTATTTGCACAATCATGAACCCTGCATCATCCATAGGGACTTGAATTGCAGCAATGTTTTTGTCAATGGGAATGTTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCTGCAATTGTGGAGAAGAACCATTCAGCACACTCGATCCTCGGCACGCCGGAATTCATGGCACCGGAGCTATACGACGAGCACTACACAGAACTGGTGGATATATACTCGTTTGGGTTGTGTGTATTGGAGATGGTTACACTTGAGCTTCCTTATAGTGAGTGTGACAATATTGCAAAGATCTACAGGAAGGTTTCTTCTGGTATGAAGCCTGATGCATTGAACAAGGTTAAGGATTCAGAGGCAAAGGCATTCATTGAGAGGTGCATTGCTCATCAACCAAGGGCAAGACCTTGTGCTTCTGAGCTTCTTAAGGATCCTTTCTTTGATGAACTTGAAGATGATGACGAAAATGAAGAATCTGATTTGTGA 900 0.4422 MPSVNPDPCDKDSEPFVEVDPTGRYGRYTELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNLCDDPAMVDRLYSEVRLLRSLAHKNIIALYSVWRDENKNTLNFITEVCTSGNLREYRKKHKHVSMKALKKWSKQILRGLNYLHNHEPCIIHRDLNCSNVFVNGNVGQVKIGDLGLAAIVEKNHSAHSILGTPEFMAPELYDEHYTELVDIYSFGLCVLEMVTLELPYSECDNIAKIYRKVSSGMKPDALNKVKDSEAKAFIERCIAHQPRARPCASELLKDPFFDELEDDDENEESDL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30518g00002 299 Gene3D Transferase(Phosphotransferase) domain 1 109 291 - -
Stsc30518g00002 299 ProSiteProfiles Protein kinase domain profile. 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30518g00002 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30518g00002 299 CDD STKc_WNK 24 285 - -
Stsc30518g00002 299 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Stsc30518g00002 299 FunFam probable serine/threonine-protein kinase WNK9 109 291 - -
Stsc30518g00002 299 PIRSF TyrPK_CSF1-R 118 296 - -
Stsc30518g00002 299 PIRSF TyrPK_CSF1-R 25 131 - -
Stsc30518g00002 299 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Stsc30518g00002 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 288 - -
Stsc30518g00002 299 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30518g00002 Stsc-Chr30518 13557 15546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30518g00002 10 288 MAP Kinase Kinase Kinase AT5G55560 81.720 9.14e-177 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc30518g00002 Pkinase 9e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30518g00002 K08867 - jre:108994268 501.13