Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30517g00001 TCTTATATTGTGTACTTAGGATCACACTCTCATGGCCCAAACCCCTCAATAAGTGATCTCAAATCTGCAACAAATTGCCATTACGATTTGTTAAGCTCACACTTGGGAAGCCATGAGAAGGCTAAAGAAGCAATATTTTACTCATACAACAAACACATCAATGGTTTTGCTGCTCTACTTGAAGAGGAAAAAGCAGCTGAAATAGCAAAAAATCCAATTGTGGTGTCTGTGTTTGAGAATAAAGGGTACAAATTGATGACTACAAGGTCATGGGAGTTTCTGGGGTTGGAGAATAGCAATGGAATTGTTTCCAAAGACTCAATTTGGGAGAAAGCAAAATATGGTGAAGCTTCAATTATTGCTAACATTGATACAGGTGTTTGGCCCGAATCAATGAGCTTTAACGACGAAGGGATGGGCCCAGTCCCAACAAAGTGGCGTGGGATATGTCAACTAGACAATTTTCGTTGCAATAGGAAATTGATAGGAGCAAGATTTTTCAGCAATGGGTACGAGTCAAAATATGGAAAACTGAGCTCATCTCTTTATACTGCAAGGGACACACTAGGACATGGTACCCAAACTTTGTCAATCACCGGGGGCAATTTTGTCCGATCAGCAAACGTTTTTGGGCTCGGTAATGGCACCGCCAAAGGTGGCTCTCCTAAAGCCCATGTTGCGGCCTACAAGGTATGTTGGGCAACCATTCAGCTTGATTGCACCGATGCCGACGTTCTGGAAGCCTTTGAGGCTTCCATCAGTGACGGCGTCGATGTAATTAACTTTTCCTTGGGAAAACCTAATCCTACAGAGTTTTTTGAGGATGGATTTTCCATCGGGGCATTCCATGCAGTTTCTAAAGGTATAATAGTGATTGCTGCCGGAGGCAATTCGGGACCAAAACTTGGAACCGTAACTAATGTGGCACCATGGATGTTCACTGTTGGTGCTAGTACAATAGACAGAGACTTTGCTAATTATGTTGCACTTGGTGACAAGAGGAACTTAATGGGAACTAGTCTTACTACAGGTTTGCCATCTAAGAAGTTCTATTCTTTGATCAATTCTGTAGATGCTAAAGTTGCAAATGCACCCATTGAAGATGCAGAAATATGTAAGATTGGAAGTCTTGATCCTAAGAAGACAAAGGGAAAAATATTGGTTTGCCTGTTAAATGAGATTGATGGGTTAGTTTATGCAGAGGAGGAAGCACTTTCAAAAGGAACAATAGGACTAATTTTGGCAAATAATAAGCAACGTGGTAATGATATCATAGCATATGCACATTTGTTGCCTACAACACATATCAACTATACAGATGGTGAATATGTTTATTCCTACATCAGAGCCACCAAGAACCCCAAGGCTTACATGAGCAGAGCAAAGACTGAAGTTGGAGTAAAACCAGCACCACTAATTGCTTCTTTATCATCTAGGGGACCCAATCTCATCCAGCCATCAATCCTAAAGCCTGATGTTATTGCACCAGGTGTAGACATTGTTTGTTCAACTATAGAATCCATAAGCCCAACTGGTTTTGAAACAGATAGCCGTAGAATCCCGTATACCATAGAGTCTGGAACTTCTATTTCTTCTCCTCATGTTGCTGCCATTGCTGCCCTCCTCAAGATTCTATATCCAGATTGGACTCCTGCAGCTATCAGATCTGCAATCATGACTACTGCAACAACAATGGACGAAAACGACATGCCACTTATGGATCAATCTAAACAAGAAGCAATTCCATTTGCTTATGGAGCAGGACACATCGAACCAGAGCTCGCGACAGATCCTGGCCTTGTTTATGATCTAAACATTGATGACTACTTGAACTTCCTATGTGCTCATCATGGTTACAACCAAACACAAATTTCAAAGTTCTATAAGAGATCTCCTCATCATGTTTCTCCAGAACACTACAACATTTTAGATTTCAATTATCCTTCAATTGTGGTTCCGAATCTTGGGAAACACTTGGTTGAAGTAAGTCGTACAGTTACAAATGTTGGGTCACCAGGAATATATTGGGTTTATGTGAAGGAACCTTATGGGGTTTCGGTTTTGGTTAAGCCAAAGTATTTGGAATTTAATAAAGTTGGTGAAAAGAAGACATTTAAGGTAAGTTTGAAGGCCTTAGAAGAAGAAGAGGATGTCAAAGTCAAACCTACAACAAGTTATGTGTTTGGAGAGTTGTGGTTGTTTGATGGCAAACACAAAGTTAAAAGCCCTCGTGTAGTGAAGCATAACAAGTGA 2253 0.407 SYIVYLGSHSHGPNPSISDLKSATNCHYDLLSSHLGSHEKAKEAIFYSYNKHINGFAALLEEEKAAEIAKNPIVVSVFENKGYKLMTTRSWEFLGLENSNGIVSKDSIWEKAKYGEASIIANIDTGVWPESMSFNDEGMGPVPTKWRGICQLDNFRCNRKLIGARFFSNGYESKYGKLSSSLYTARDTLGHGTQTLSITGGNFVRSANVFGLGNGTAKGGSPKAHVAAYKVCWATIQLDCTDADVLEAFEASISDGVDVINFSLGKPNPTEFFEDGFSIGAFHAVSKGIIVIAAGGNSGPKLGTVTNVAPWMFTVGASTIDRDFANYVALGDKRNLMGTSLTTGLPSKKFYSLINSVDAKVANAPIEDAEICKIGSLDPKKTKGKILVCLLNEIDGLVYAEEEALSKGTIGLILANNKQRGNDIIAYAHLLPTTHINYTDGEYVYSYIRATKNPKAYMSRAKTEVGVKPAPLIASLSSRGPNLIQPSILKPDVIAPGVDIVCSTIESISPTGFETDSRRIPYTIESGTSISSPHVAAIAALLKILYPDWTPAAIRSAIMTTATTMDENDMPLMDQSKQEAIPFAYGAGHIEPELATDPGLVYDLNIDDYLNFLCAHHGYNQTQISKFYKRSPHHVSPEHYNILDFNYPSIVVPNLGKHLVEVSRTVTNVGSPGIYWVYVKEPYGVSVLVKPKYLEFNKVGEKKTFKVSLKALEEEEDVKVKPTTSYVFGELWLFDGKHKVKSPRVVKHNK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30517g00001 750 Gene3D - 321 465 - -
Stsc30517g00001 750 Pfam Subtilase family 117 588 IPR000209 GO:0006508|GO:0008236
Stsc30517g00001 750 SUPERFAMILY Subtilisin-like 86 600 IPR036852 GO:0004252|GO:0006508
Stsc30517g00001 750 CDD Peptidases_S8_3 83 563 IPR034197 -
Stsc30517g00001 750 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Stsc30517g00001 750 PRINTS Subtilisin serine protease family (S8) signature 115 134 IPR015500 -
Stsc30517g00001 750 PRINTS Subtilisin serine protease family (S8) signature 187 200 IPR015500 -
Stsc30517g00001 750 CDD PA_subtilisin_like 327 456 - -
Stsc30517g00001 750 Pfam Fibronectin type-III domain 644 746 IPR041469 -
Stsc30517g00001 750 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Stsc30517g00001 750 Gene3D Peptidase S8/S53 domain 119 609 IPR036852 GO:0004252|GO:0006508
Stsc30517g00001 750 FunFam Subtilisin-like protease SBT5.3 1 86 - -
Stsc30517g00001 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 745 IPR045051 -
Stsc30517g00001 750 Pfam Peptidase inhibitor I9 1 86 IPR010259 -
Stsc30517g00001 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 86 IPR037045 -
Stsc30517g00001 750 FunFam subtilisin-like protease SBT1.5 321 465 - -
Stsc30517g00001 750 Gene3D - 613 749 - -
Stsc30517g00001 750 ProSiteProfiles Serine proteases, subtilase domain profile. 90 596 - -
Stsc30517g00001 750 FunFam Subtilisin-like protease SBT1.5 117 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30517g00001 Stsc-Chr30517 2570 8923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30517g00001 1 747 Subtilisin-like Serine Gene Family AT5G59810 53.538 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30517g00001 - - pcin:129318364 1050.81