Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30513g00009 ATGACCATTGATATGCCACCACCTGTGGCACAAAGCGTGAGGACTAATAGATCTTCATTTAGCTCAAGCCATGGCAATGATGATAATACTCTTCACCACTTTGCTGCTGTTAGTAATGGTGATGGCTATGAAAGTGATAGCTCAAGTTTTGCACCACCCACACCAAACACTCTGTCAACAGCTATTCCTGCTGAGCTTGCTGGAGTTGTACCCTTGATTGATAGATTCCAGGTAGAAGGATTTTTAAAATTGATGCACAAACAAATTCAATCTGCTGGCAAACGAGGATTTTTTTCTAAAAGATCCGTGGGACCACAAGTTCGAGAGAAGCTTACATTCGAGGACATGCTTTGTTTCCAGAAGGATCCAATCCCAACATCGTTGCTTAAGCTGAACAGCGATTTGGCACTTCGTTCAACAAAATTATTCCAGATAATTTTGAAGTATATGGAAGTTGATTCATCTGATCGTGCATCTCCAATGAGCTTAGATGAACGAGTTGAGCTTGTAGGCAAACTATACAAGCAAAGTTTGAAACATTCGGAACTCCGGGATGAACTTTTTGTCCAAATATCAAAACAAACAAGGAACAACCCAGATAGGGAATCATTGATTAAATCATGGGAGCTTATGTATTTATGCGTATCTTGCATGACTCCTAGTAAGGACATTGGGGGATATCTATCAGAATATATTCATCACATAGTAAATGGTGTGAATACCGACCCCGAGATACGAGCCATTGCATTGAATACATTGAGTGCATTGAAGCGTTCTGTCAAGGCTGGTCCTAGGCATATAATTCCTGGGCCCAAGGAGATTGAAGCTCAGTTGACTGGGAAAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACCTTTGAAGAAATTACATATGACATGTCAACAACGGTTGCTGATGCTGTTGAGGAACTTGCAGGGATCATCAAGTTGTCAACATACTCTAGCTTTAGCCTATTTGAATGTCGCAAAGCTGTTACTGCCTCCAAATCACCTGATTCTGAGGAGTATGTTGGGCTAGATGATAATAAACATATTGGGGATCTACTAGCAGAATTTAAGGCAGCAAAAGAACGAAGTAAGGGAGAAATTTTGCACTGTAAATTGATTTTCAAGAAGAAATTATTTCGGGAATCGGATGAAGCTGTGACAGATCCAATGTTTATGCAGTTGTCCTATGTACAATTGCAACATGATTATATTTTTGGACATTATCCGGTTGGAAGAGATGAAGCTTCCCAGCTATCTGCATTGCAAATCTTGGCTGAGATTGGATTCGTTAGAAGACCCGAATCATGCTCTGACTGGAGCTCATTTCTCGAGCGATTTTTGCCTAGACAAATTGCAATGACACGAGGAAGACGGGAATGGGAGCTGGACATTCTTTCATGCTACCATTCACTGGAGCATCTGACAAAAGATGATGCAAGGCAGAAATTTCTGCATATACTCAGGACACTTCCATATGGGAATTCTGTTTTCTTCAACGTTCGCAAGATTGATGATCCAATTGGGCTTTTACCTGGACGAATAATATTAGGAATTAACAAAAGAGGGGTCCATTTTTTCCGTCCGGTTCCTAAGGAGTATTTGCATTCAGCTGAGTTGAGAGATATAATGCAATTTGGAAGCAGCAATACTGCAGTGTTTTTTAAAATGCGAGTTGCCGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGTGAGGAAATTTGTGTAGCTCTTCAAACACACATAAATGATGTAATGCTCCGTCGCTACTCAAAAGCACGGACTACTGCTGGTGGTTCTTTGAATGAAGATATCTCCAGTAATTTCAAGTCTCCTAATTCAGAATCATATGAGAAGCGTATCCAAGACTTATCGAAGGCTGCTGAAGAGTCTAAAAGAATTGCTGATCAATTGAAAGAAGAATTGCACGAGAAGCAAAAACAGGAAGAGAAAATGCTACAAGAGTTGGAAAGCTTGAAAGAATCCTTAAATGTTGATAAGCTTAGTCTTGAGGAAGTTACAAATGAACGTGATAGGCTTATCTCATTATGCGATGAAAAAGACAAGGCTCTTCAGGCTGCAATTCTAGAGAAAAGGAACATGGAAACAAGGATGACCAAGTTGAATAAATTGGTTACTGAGAAAGAAAATACTACCCAAAGGGAGCCTATTGGAGCAAATAAGCAAGGTTTGCAAAAGCTTGAAGACGAGCTAAAACTTTGTAAAGATGAGCTTCGTATAGCTGAAGAAACCATCAAAAGCTTGACAACTGACAAATTGATTTTGGAGCAAAGGCTGTCTAGACTTGAGAAGAAAAATTCTGAAGAGAATTCTTCTATTCAACTGAAACTTGAACAAGAACTCAAAACTCTGAAAGGTCAAGTTTATGACCTCGAAAGAAAAGTAGAAGTATTCAGACAAGAGTTAGTTGCTGCTGAGTCTACACTTTCAGTCAAGGACTCTGAATTGACTGCACTGAAGAACAATTTGAGAGAGCTTGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAACAAACAAACAGCTGCCATATTGAAGATGCAAGCATCTCAACTAGCTGACATGGAGTTGCTTTATAAGGAAGAACAAGTTTTGAGGAAGCGATATTTTAATACGATAGAAGATATGAAAGGAAAGATAAGAGTTTACTGTCGGCCAAGACCTCTAAGTGACAAAGAGATTGCTGAGAAGGATGGAAATTCTCTTACTACTATAGATGAGTTTACTGTTGAGCATCAGTGGAAAACCGATAAACCAAAACAACACATATATGATCGCGTGTTTGATGGCAATGCTACTCAAGAAGATGTATTTGAGGATACAAGGTACTTGGTGCAATCGGCCGTAGATGGTTATAATGTCTGCATTTTTGCTTATGGTCAAACTGGCTCTGGAAAGACATTTACAATTTATGGATCTGAAAGCAATCCTGGGCTTACTCCGCGTGCCACTGCAGAACTTTTTAGAATTTTAAGGAGAGATAGTAACAAGTTTTCGTTTTCCTTGAAGGCATACATGGTGGAATTATACCAAGATACACTTGTTGATCTTTTGTTACCAAAGAATGCCAAGCGTTTAAGATTGGATATTAAGAAGGATTCAAAGGGAATGGTAACTGTGGAAAATGTAACAACCATGTCAATTTCTACTATGGATGAACTGAACAGCATAATACAAAAAGGATCTGAAAGGCGACACACTTCCGAAACACAAATGAATGAAGAAAGCTCAAGATCTCACCTTATTCTATCAATTGTAATTGAAAGTACTAACCTTCAAAGTCAATCAGCTGCAAGGGGAAAGCTGAGTTTTGTAGACCTTGCTGGTTCAGAGAGAGTGAAAAAATCAGGTTCTGAAGGTAGTCAACTTAAAGAAGCACAGAGTATCAACAAATCATTATCAGCACTTGGAGATGTTATTAGTGCTTTATCCTCTGGTGGACAACACATACCTTATAGGAATCACAAGTTAACCATGTTGATGAGTGACTCGTTGGGGGGAAATGCGAAAACTCTCATGTTTGTGAATGTGTCTCCAGCACAGTCTAACTTGGATGAGACTCATAACTCTCTTATGTATGCATCAAGGGTGAGGTCAATTGTGAATGATCCAAGCAAAAATGTTAGTTCAAAAGAGATAGCTAGGCTGAAGAAATTGGTGGCATATTGGAAGGAGCAAGCAGGTAGAAAAGGGGAGGATGAAGATTTAGAAGAAATTCAAGAAGTAAGACCTTCTAGAGATAGGACTGATGGCCGCCATTCTCTGTAG 3810 0.3929 MTIDMPPPVAQSVRTNRSSFSSSHGNDDNTLHHFAAVSNGDGYESDSSSFAPPTPNTLSTAIPAELAGVVPLIDRFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVREKLTFEDMLCFQKDPIPTSLLKLNSDLALRSTKLFQIILKYMEVDSSDRASPMSLDERVELVGKLYKQSLKHSELRDELFVQISKQTRNNPDRESLIKSWELMYLCVSCMTPSKDIGGYLSEYIHHIVNGVNTDPEIRAIALNTLSALKRSVKAGPRHIIPGPKEIEAQLTGKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFSLFECRKAVTASKSPDSEEYVGLDDNKHIGDLLAEFKAAKERSKGEILHCKLIFKKKLFRESDEAVTDPMFMQLSYVQLQHDYIFGHYPVGRDEASQLSALQILAEIGFVRRPESCSDWSSFLERFLPRQIAMTRGRREWELDILSCYHSLEHLTKDDARQKFLHILRTLPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARTTAGGSLNEDISSNFKSPNSESYEKRIQDLSKAAEESKRIADQLKEELHEKQKQEEKMLQELESLKESLNVDKLSLEEVTNERDRLISLCDEKDKALQAAILEKRNMETRMTKLNKLVTEKENTTQREPIGANKQGLQKLEDELKLCKDELRIAEETIKSLTTDKLILEQRLSRLEKKNSEENSSIQLKLEQELKTLKGQVYDLERKVEVFRQELVAAESTLSVKDSELTALKNNLRELEELREMKEDIDRKNKQTAAILKMQASQLADMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRPRPLSDKEIAEKDGNSLTTIDEFTVEHQWKTDKPKQHIYDRVFDGNATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSESNPGLTPRATAELFRILRRDSNKFSFSLKAYMVELYQDTLVDLLLPKNAKRLRLDIKKDSKGMVTVENVTTMSISTMDELNSIIQKGSERRHTSETQMNEESSRSHLILSIVIESTNLQSQSAARGKLSFVDLAGSERVKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAQSNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRKGEDEDLEEIQEVRPSRDRTDGRHSL 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30513g00009 1269 Coils Coil 821 858 - -
Stsc30513g00009 1269 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Stsc30513g00009 1269 Pfam Kinesin motor domain 899 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30513g00009 1269 Gene3D Kinesin motor domain 880 1216 IPR036961 -
Stsc30513g00009 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 893 1243 IPR027417 -
Stsc30513g00009 1269 PRINTS Kinesin heavy chain signature 1115 1133 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30513g00009 1269 PRINTS Kinesin heavy chain signature 1084 1101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30513g00009 1269 PRINTS Kinesin heavy chain signature 965 986 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30513g00009 1269 PRINTS Kinesin heavy chain signature 1164 1185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30513g00009 1269 MobiDBLite consensus disorder prediction 603 622 - -
Stsc30513g00009 1269 Coils Coil 696 723 - -
Stsc30513g00009 1269 SMART B41_5 279 501 IPR019749 -
Stsc30513g00009 1269 Coils Coil 786 813 - -
Stsc30513g00009 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 499 608 - -
Stsc30513g00009 1269 MobiDBLite consensus disorder prediction 1 38 - -
Stsc30513g00009 1269 SUPERFAMILY Prismane protein-like 836 898 IPR011254 GO:0003824|GO:0016491
Stsc30513g00009 1269 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Stsc30513g00009 1269 ProSiteProfiles Kinesin motor domain profile. 893 1214 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30513g00009 1269 CDD KISc_C_terminal 891 1216 - -
Stsc30513g00009 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 282 383 - -
Stsc30513g00009 1269 Pfam FERM central domain 387 501 IPR019748 -
Stsc30513g00009 1269 FunFam Kinesin-like calmodulin binding protein 384 495 - -
Stsc30513g00009 1269 Gene3D - 282 383 - -
Stsc30513g00009 1269 SMART kinesin_4 891 1222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30513g00009 1269 PANTHER KINESIN-LIKE PROTEIN KLP-3 602 1252 IPR027640 GO:0003777|GO:0007018
Stsc30513g00009 1269 CDD FERM_B-lobe 396 494 IPR019748 -
Stsc30513g00009 1269 MobiDBLite consensus disorder prediction 1240 1269 - -
Stsc30513g00009 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Stsc30513g00009 1269 Coils Coil 736 784 - -
Stsc30513g00009 1269 Gene3D - 384 495 IPR014352 -
Stsc30513g00009 1269 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Stsc30513g00009 1269 SUPERFAMILY Second domain of FERM 379 496 IPR035963 -
Stsc30513g00009 1269 CDD FERM_C_KCBP 498 604 - -
Stsc30513g00009 1269 Gene3D - 1217 1265 - -
Stsc30513g00009 1269 MobiDBLite consensus disorder prediction 603 620 - -
Stsc30513g00009 1269 ProSitePatterns Kinesin motor domain signature. 1114 1125 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc30513g00009 1269 Gene3D - 499 605 IPR011993 -
Stsc30513g00009 1269 MobiDBLite consensus disorder prediction 9 33 - -
Stsc30513g00009 1269 FunFam Kinesin-like calmodulin-binding protein 837 1216 - -
Stsc30513g00009 1269 SUPERFAMILY PH domain-like 501 589 - -
Stsc30513g00009 1269 Coils Coil 619 681 - -
Stsc30513g00009 1269 Gene3D MyTH4 domain 98 279 IPR038185 -
Stsc30513g00009 1269 ProSiteProfiles FERM domain profile. 283 595 IPR000299 GO:0005856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30513g00009 Stsc-Chr30513 40943 47882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30513g00009 51 1264 Calmodulin-binding Proteins AT5G65930 72.802 0.0 1788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30513g00009 - - gmx:100782701 2026.52