Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30513g00004 ATGATACTCATTGATGAGACAGATAAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGATAGGAGAACAGGCAAACACATTCTATCATACATCAACACTACAAGAAAGCCTATGTCAAGGATATTTGCAGCCAAGACAGTTCTAGGAACTCGGCCTGCACCCCGAGCAGCGGCATTCTCTTCTAAAGGCCCCAATTCCTTAACCCCAGAAGTTTTGAAGCCTGATATTACAGCTCCCGGATTAAACATTCTCGCAGCATGGTCTCCTGCAGCAGTTGGAAACATGAAGTTCAATATTATATCAGGAACTTCTATGGCTTGTCCTCATGTATCTGGAATTGCAGCATTAGTCAAAGCTGTTCATCCTTCATGGTCTCCCTCTGCTATCAAATCTGCCATCATGACAACTGCTACTATTCTGGATAAGCAGCACAAACCCATTAGAGAGGACCCTGATGGAAGAAGAGCTAATGCATTTGACTATGGATCAGGGTTTGTGAACCCCACAAGAGTCCTACATCCTGGACTTGTCTATGATTCACAGCCAGAAGATTATATTGACTTCCTATGTTCAATTGGTTATGATAAGAGGTCACTCCATCATGTTACAGGAGACAACAGCACATGTGACGGGGCATTCAAGAAACCATTCGACCTCAACTATCCATCTATTGCAGTGCCTAATCTTGAAGACAACTTTTCAGTAACACGTGTTGTCACTAATGTTGGAGAAGCAAGAAGTATATATAAATCTGTAGTGGTGTCTCCTGCTGGAGTTAATGTCACTGTTGTGCCGGACAGGTTAATCTTCAGAAGAATTGGACAGAGAATCAAGTTCACAGTGAATTTCAAAGTGGCTGCTCCTTCAAAGGGCTATACATTTGGGTTCTTGTCATGGAAGAATGGCAGGTCACAAGTCACAAGTCCTATAGCTGTCCGGGTTTCATCAGCAGGCTTCGGGTTGGTCAGATAA 981 0.4322 MILIDETDKDVAIPFVIPSAIVDRRTGKHILSYINTTRKPMSRIFAAKTVLGTRPAPRAAAFSSKGPNSLTPEVLKPDITAPGLNILAAWSPAAVGNMKFNIISGTSMACPHVSGIAALVKAVHPSWSPSAIKSAIMTTATILDKQHKPIREDPDGRRANAFDYGSGFVNPTRVLHPGLVYDSQPEDYIDFLCSIGYDKRSLHHVTGDNSTCDGAFKKPFDLNYPSIAVPNLEDNFSVTRVVTNVGEARSIYKSVVVSPAGVNVTVVPDRLIFRRIGQRIKFTVNFKVAAPSKGYTFGFLSWKNGRSQVTSPIAVRVSSAGFGLVR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30513g00004 326 SUPERFAMILY Subtilisin-like 58 273 IPR036852 GO:0004252|GO:0006508
Stsc30513g00004 326 ProSiteProfiles Serine proteases, subtilase domain profile. 1 175 - -
Stsc30513g00004 326 Pfam Subtilase family 49 143 IPR000209 GO:0006508|GO:0008236
Stsc30513g00004 326 Gene3D - 2 51 - -
Stsc30513g00004 326 FunFam Subtilisin-like protease SBT1.5 192 318 - -
Stsc30513g00004 326 Pfam Fibronectin type-III domain 221 315 IPR041469 -
Stsc30513g00004 326 ProSitePatterns Serine proteases, subtilase family, serine active site. 105 115 IPR023828 -
Stsc30513g00004 326 Gene3D - 192 318 - -
Stsc30513g00004 326 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 315 IPR045051 -
Stsc30513g00004 326 Gene3D Peptidase S8/S53 domain 52 188 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30513g00004 Stsc-Chr30513 21971 24653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30513g00004 23 318 Subtilisin-like Serine Gene Family AT4G21640 45.667 1.66e-81 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30513g00004 - - aip:107642485 610.142