Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30512g00002 ATGGAGTGCAATAAAGATGAGGCAGCTAGGGCCAAAGAAGTGGCAGAGAGGAAATTATCTGAAAAGGACTATGTTGGTGCAAAAAAGTTTGCTCTCAAGGCTCTTAATTTGTATCCTTCACTGGAGGGTCTTACCCAGTTTATGACAACCTTGGATGTTTATACTTCCGCTGAGAAGAAAATAAGTGGAGTAACAGATTGGTATAATGTACTTGGAGTGACTCCTTATGTCGATGATGAGTTACTTAAAAAGCAGTACAGAAAGCTGATTCTCGCCCTTCATCCTGACAAAAACAAGTCTCCAGGTGCAGAGGGTGCATTTAAACTTGTATCCGAGGCATGGAGTTTGCTATCAGATAAGGCGAAAAGACAAGCATATAATCAGAAGAGGAGTTCATCAGGGTTTCAGCATAATGCTCCCAACCGTGCTGTGCCAAAACCACAAGCACCCAATCCGAATGGTGGTTATTTTCCCAATAAGAAGGCAGCTTCAAATGCAAGAACTGGAAGTAATAATCCTCAGGAACCTCCAGCATCTGTTCCTCCTCCATATAAAAAGTTTGCTACCTTTTGGACCGTCTGTACTCATTGTAGGATACAATTAGAATATCCCAGGATTTATTTGAATCATCCCCTTCGGTGTCCAATCTGTAGTGAGGCGTTTGCGGCTGTAGAAAAGGTTCTGCCTGCCGGTGATGTTAAGTCTTCTAATTTGTCCACTCAGCAACATCAACAAAATTCTCAGCCTCCCCCACATGCTCGTTGGAATCACCCCACTACTAATCCAGGAAGAGCTCATGCAGTTTCTCAAAACAAAGAATCAAGCAGTAAGCGAGGCATGCCTTTTAGTAACACAGACTTCCAGTGCGACCCTCACTTGAGAATGCATGGTATTGCAAGCAAAGATAGTTCAGCATCTATGCCGGCATCTGTTAAGAAGAAGGCAAGTGCGAAATTAAGAACCGAATGTGAGGGGTCCCATTCAATTGCTGCTAAGGAGAGGAGTCCAATGTACAAGAGGCCTGATGGTTCTTTCAATAATGTTGAAAAAACTGCAAAGAAAATGAGATCAGATTACATTCGCATGTACATGCCAAATATTACGACTAAGGGTATAGAAAGGAGGCATGGTTTTTCAGGTTTTACTAACAAGAATCACGGCACGAGAGAGTTGTCAACGCATGAATTGCGAAACATGTTGATCAATAAATCGCAGAATGAGATTCGCAAGAAACTTGAAGAATGGAAATCAAGAGCTGATGAAGATAAGGCTACAAACAAGGACAAAGGAACTGAGACCCAAAAAGGCAGGTTAAAGGACAAAACTTGTTCAGAGAAGCAGGAAGATAAGGTTATGAACAAGGAAAAAGGAAATGTGAGACAAAAAGGCATGTTCAATGACAAGACACTCGGCTTGGAGAAGCATGAAGATTCCACCATTAATGGTAAGGGGCATCTCGAAAGTGATCCTGCTCTCACAACATCTGATGCTTCTGGAAAGGAGTACCAAGACTACACTGTAATTCCCGTTCTTGATTCTGATTTTCACAATTTTGACTTGGAAAGAGCTGAAAATTCATTTGCAGAGGACCAGGTATGGGCAGCTTACGACGATGATGATGGAATGCCTCGGTTTTATGCTAAAGTTCAGAAGGTGATGTCGATGAAGCCATTTAAAATGTGTATCAGTTGGCTTAACTCTCGAAGCAACAAGGAATTGGGACCAATGGATTGGATAGGTTCGGGTTTTTATAAAACTTGTGGGCATTTTAACATTGGGAGGCGTGAAATAACTGAATCATTAAATTCCTTTTCCCATAAGGTTAGATGGACAAAAGGCACCAGAGGAGTTGTTCACATCTTTCCAAGGAAGGGGGATATCTGGGCACTTTATAGAAACTGGTCTCCTGATTGGAATGAAGATACTCCTGATGAAGTGAAGCACAAATATGATATGGTGGAAGTAATTGAAGATTACAATGACAAGGAAGGTGTACTAGTTACCCCACTTATCAAGGTTGATGGCTTTTTGACAGTGTTTCAGAAGATTGAAGGTCGTGATGATCTGGTAAGGAAGATTCCCAAAGTGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATTACTTGCTTACAGGAGAAGAAGCTCATAATGCTCCAAAGGGTTGTCTAGAGTTGGATCCAGCAGCAACCTCTTTAGACCTCCTTCAGACAAAGAATGAAGCCAACGGAGCATTGAACAATGTTGGAAAATCAAATAAAGAAGACACAACTTAG 2274 0.4164 MECNKDEAARAKEVAERKLSEKDYVGAKKFALKALNLYPSLEGLTQFMTTLDVYTSAEKKISGVTDWYNVLGVTPYVDDELLKKQYRKLILALHPDKNKSPGAEGAFKLVSEAWSLLSDKAKRQAYNQKRSSSGFQHNAPNRAVPKPQAPNPNGGYFPNKKAASNARTGSNNPQEPPASVPPPYKKFATFWTVCTHCRIQLEYPRIYLNHPLRCPICSEAFAAVEKVLPAGDVKSSNLSTQQHQQNSQPPPHARWNHPTTNPGRAHAVSQNKESSSKRGMPFSNTDFQCDPHLRMHGIASKDSSASMPASVKKKASAKLRTECEGSHSIAAKERSPMYKRPDGSFNNVEKTAKKMRSDYIRMYMPNITTKGIERRHGFSGFTNKNHGTRELSTHELRNMLINKSQNEIRKKLEEWKSRADEDKATNKDKGTETQKGRLKDKTCSEKQEDKVMNKEKGNVRQKGMFNDKTLGLEKHEDSTINGKGHLESDPALTTSDASGKEYQDYTVIPVLDSDFHNFDLERAENSFAEDQVWAAYDDDDGMPRFYAKVQKVMSMKPFKMCISWLNSRSNKELGPMDWIGSGFYKTCGHFNIGRREITESLNSFSHKVRWTKGTRGVVHIFPRKGDIWALYRNWSPDWNEDTPDEVKHKYDMVEVIEDYNDKEGVLVTPLIKVDGFLTVFQKIEGRDDLVRKIPKVEMFRFSHQVPNYLLTGEEAHNAPKGCLELDPAATSLDLLQTKNEANGALNNVGKSNKEDTT 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30512g00002 757 MobiDBLite consensus disorder prediction 262 283 - -
Stsc30512g00002 757 SUPERFAMILY Chaperone J-domain 64 126 IPR036869 -
Stsc30512g00002 757 MobiDBLite consensus disorder prediction 234 287 - -
Stsc30512g00002 757 Pfam DnaJ domain 66 127 IPR001623 -
Stsc30512g00002 757 PRINTS DnaJ domain signature 102 122 IPR001623 -
Stsc30512g00002 757 PRINTS DnaJ domain signature 86 101 IPR001623 -
Stsc30512g00002 757 PRINTS DnaJ domain signature 68 86 IPR001623 -
Stsc30512g00002 757 Pfam Domain of unknown function (DUF3444) 509 714 IPR024593 -
Stsc30512g00002 757 MobiDBLite consensus disorder prediction 478 498 - -
Stsc30512g00002 757 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Stsc30512g00002 757 SMART dnaj_3 65 122 IPR001623 -
Stsc30512g00002 757 MobiDBLite consensus disorder prediction 418 452 - -
Stsc30512g00002 757 MobiDBLite consensus disorder prediction 127 182 - -
Stsc30512g00002 757 MobiDBLite consensus disorder prediction 234 254 - -
Stsc30512g00002 757 PANTHER BNAC03G44070D PROTEIN 1 730 - -
Stsc30512g00002 757 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Stsc30512g00002 757 Gene3D DnaJ domain 64 172 IPR036869 -
Stsc30512g00002 757 CDD DnaJ 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30512g00002 Stsc-Chr30512 3724 6016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30512g00002 4 223 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.858 3.45e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30512g00002 - - aip:107647573 1157.51