Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30510g00006 ATGCTTTCCACTCTCCCTCTCTCCAATCCTCTCCTTTCTAATCCATTCTCTGCTGCCACCGGCTATGCCGACGGTTGTTTCAGCTTGTGGGACTTCCCTGACCTTTTCACCCCCTCTAAACCAACCAATAGTCCTAAGACCGTTACTTCGAGTTCCGGCTCGGATGAACTGAACCAACCCAACGATGAACCAGATAGGTCCCATGACGACAAACCGGCCAGACCGAACCGTGTTATGGTTATGGATGAACGGAAGCGCCGGCGCATGATATCGAACCGGGAATCTGCCCGGCGGTCGCGGATGCGCAAGCAGAGGCACCTAGAAAACCTACGGAACCAGTTGAACAAGTGTAGGTTCGAAAACCGGGAACTGAACAACCGGTTGCAGTTCATCCTCCATCACTTGAACCGGATTCGAACCGAAAACCAGTGGCTCCGGTCCGAACGAACCGCTTTGTGGCAAAAACTGTCCGACTTTACTCAAATCTTGGTTTTCCAAGAATTGCATCCTTTGGATCATATTTCCACCGTTCCCTGTACGGTGGCCATGCAATAG 555 0.5171 MLSTLPLSNPLLSNPFSAATGYADGCFSLWDFPDLFTPSKPTNSPKTVTSSSGSDELNQPNDEPDRSHDDKPARPNRVMVMDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRFENRELNNRLQFILHHLNRIRTENQWLRSERTALWQKLSDFTQILVFQELHPLDHISTVPCTVAMQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30510g00006 184 MobiDBLite consensus disorder prediction 41 104 - -
Stsc30510g00006 184 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Stsc30510g00006 184 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Stsc30510g00006 184 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Stsc30510g00006 184 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Stsc30510g00006 184 Gene3D - 82 135 - -
Stsc30510g00006 184 FunFam BZIP transcription factor 82 133 - -
Stsc30510g00006 184 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 166 - -
Stsc30510g00006 184 Coils Coil 93 127 - -
Stsc30510g00006 184 MobiDBLite consensus disorder prediction 59 97 - -
Stsc30510g00006 184 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Stsc30510g00006 184 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30510g00006 Stsc-Chr30510 34398 35459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30510g00006 47 169 bZIP Transcription Factor Family AT2G22850 37.143 1.00e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30510g00006 - - ahf:112800711 320.087