Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30508g00008 | ATGATGCTACAACATTCAAACATTTCCATAGAACAACCTTTTCTGCTTCTGATTCTGGTTCTTCTCTTCCCTCAAACTGCAACATCTGATCTACATTCAGAAAAGCAAGCTCTCCTTGATTTTGCATCAGCATTTCACCATGGCAAAAAGGTAAACTGGAACATAAACACCTCAATCTGCAATTCATGGAATGGAGTTACCTGCAATCCCAATGGCACACATGTAATTTCAGTGAGGCTACCAGGTGTTGGTTTGAGAGGTTCTCTCCCACCAAACACCATTGGTAACCTCAATGGCCTCACTAGTCTTAGTCTAAGGTCCAACACATTGAGTGGGAAAATCCCAAATGACATTCTTGCCCTTCATTCCTTAAGGTTTATGTATCTTCAACATAACAATTTCTCAGGTGAATTGCCAAGTTTTCTTCCACCTAGGCTTGTGTTTCTTGATTTGTCACATAACTCTTTCAATGGAGAGATTCCAAACTCAATCCAAAGTTTGACTAATCTAACTGGTTTGTTCCTCAAGAACAATTCACTTATAGGGCCTATTCCTAATGTTACCCTTCCTAGCCTTAAGGATTTGGATTTGAGCTTTAACAACCTTAATGGTTCAATTCCTTTAGCATTTCAAAAGTTTCAATCTTCATCATTTGATGGGAATTTCATGCTATGTGGACCACCTTTGAGAAAACAATGTTCTTCATCAAGTCCTGCTACTAGTCCAATGCTGTCTCCACAAATAGTATCTCAAAATTCAAGTGATGTTTCCAAGAAGAAGCCGAGTCTCAGCGGGGTGATCGCAGTTGCTTTGGGCGGTTTCGGACTACTTTTCCTGCTAGTTCTGATGCTGGTGTTGTGCTGTCTTAAGAAGAGAGTTGGTGAACAAAATGAGGCACCAAAAGAGAGTAAACTTGATGAGAAGCTTAGGGAGGATTTTGGGAGTGGTGTGCAAGAGCCTGAGAAGAACAAGCTGGTGTTTTTCGGAGGGTGTTCTTATAACTTTGATCTTGAAGATTTGTTAAGAGCTTCAGCTGAAGTTCTTGGTAAGGGAAGTTGTGGAACAACATATAAGGCAATCTTGGAAGAAGGGACAGTAGTTGTTGTGAAGAGGCTGAAGGAAGTTGCAGTTGGGAAGAGAGAATATGAGCAGCAAATGGAAATTGTGAGAAAGCTTGATCAGCATCCAAATGTTGTTCCACTTAGTGCTTACTATTATTCCAAGGATGAGAAGCTTGTGGTTTATGATTACCTACCATTTGGAAGCTTTTCCAAGTTACTGCATGGAACAAGGGAAACGGGAAGAAATCCACTAGATTGGGACACCAGATTGAAGATAGTGCTTGGAGCTGCTAAGGGTGTTGCTCATATCCACTCTGCCAGTGGAAGGAAATTTGTCCATGGCAATATAAAATCATCTAATGTGCTCCTCTCAGGTGATCTACAAGGCTGCATATCAGATTTCGGCTTAGCTCCTCTAACAAGTTTCTCAGCCTCCATCAGGAGTCCAGGATACTTAGCCCCGGAGGTTATCGAGACCCGAAAATCCACACAAAAATCTGATGTGTACAGCTTCGGCGTTCTCCTTCTCGAGATGTTGACCGGCAAGACACCGGTTCAGTATTCAGGGCACGATGATGTGGTTGATCTTCCGAGATGGGTTCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTATCCAAATATTGAAGAAGAATTGGTGCAAATGCTGCAACTTTCAATGGCATGTGTTGCAGTGGTTCCTGACACAAGACCCTCAATGGAGGAAGTTGCAAGGGTTATTGAAGAAATCATAGGATCCTATTATGAGAACCAGACAACAACATTATCAGAAAACAAGTTCAAGGGATCTCATGCTTTCATTCCACACTACTGA | 1920 | 0.4177 | MMLQHSNISIEQPFLLLILVLLFPQTATSDLHSEKQALLDFASAFHHGKKVNWNINTSICNSWNGVTCNPNGTHVISVRLPGVGLRGSLPPNTIGNLNGLTSLSLRSNTLSGKIPNDILALHSLRFMYLQHNNFSGELPSFLPPRLVFLDLSHNSFNGEIPNSIQSLTNLTGLFLKNNSLIGPIPNVTLPSLKDLDLSFNNLNGSIPLAFQKFQSSSFDGNFMLCGPPLRKQCSSSSPATSPMLSPQIVSQNSSDVSKKKPSLSGVIAVALGGFGLLFLLVLMLVLCCLKKRVGEQNEAPKESKLDEKLREDFGSGVQEPEKNKLVFFGGCSYNFDLEDLLRASAEVLGKGSCGTTYKAILEEGTVVVVKRLKEVAVGKREYEQQMEIVRKLDQHPNVVPLSAYYYSKDEKLVVYDYLPFGSFSKLLHGTRETGRNPLDWDTRLKIVLGAAKGVAHIHSASGRKFVHGNIKSSNVLLSGDLQGCISDFGLAPLTSFSASIRSPGYLAPEVIETRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDDVVDLPRWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLSMACVAVVPDTRPSMEEVARVIEEIIGSYYENQTTTLSENKFKGSHAFIPHY | 639 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30508g00008 | 639 | FunFam | pollen receptor-like kinase 1 | 311 | 417 | - | - | |
Stsc30508g00008 | 639 | SUPERFAMILY | L domain-like | 43 | 230 | - | - | |
Stsc30508g00008 | 639 | MobiDBLite | consensus disorder prediction | 235 | 258 | - | - | |
Stsc30508g00008 | 639 | Gene3D | Ribonuclease Inhibitor | 144 | 235 | IPR032675 | - | |
Stsc30508g00008 | 639 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 418 | 623 | - | - | |
Stsc30508g00008 | 639 | PANTHER | OS05G0588300 PROTEIN | 15 | 614 | - | - | |
Stsc30508g00008 | 639 | Pfam | Leucine rich repeat | 88 | 134 | IPR001611 | GO:0005515 | |
Stsc30508g00008 | 639 | FunFam | Leucine-rich repeat receptor-like protein kinase | 33 | 143 | - | - | |
Stsc30508g00008 | 639 | Gene3D | Ribonuclease Inhibitor | 32 | 143 | IPR032675 | - | |
Stsc30508g00008 | 639 | Gene3D | Phosphorylase Kinase; domain 1 | 311 | 417 | - | - | |
Stsc30508g00008 | 639 | SUPERFAMILY | Protein kinase-like (PK-like) | 346 | 608 | IPR011009 | - | |
Stsc30508g00008 | 639 | Pfam | Leucine rich repeat N-terminal domain | 33 | 69 | IPR013210 | - | |
Stsc30508g00008 | 639 | CDD | STKc_IRAK | 348 | 612 | - | - | |
Stsc30508g00008 | 639 | ProSiteProfiles | Protein kinase domain profile. | 342 | 613 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30508g00008 | 639 | PRINTS | Leucine-rich repeat signature | 146 | 159 | - | - | |
Stsc30508g00008 | 639 | PRINTS | Leucine-rich repeat signature | 189 | 202 | - | - | |
Stsc30508g00008 | 639 | Pfam | Protein kinase domain | 345 | 606 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30508g00008 | 639 | Gene3D | Transferase(Phosphotransferase) domain 1 | 419 | 633 | - | - | |
Stsc30508g00008 | 639 | FunFam | Leucine-rich repeat receptor-like protein kinase | 144 | 233 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30508g00008 | Stsc-Chr30508 | 37071 | 39679 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30508g00008 | 16 | 627 | Receptor kinase-like Gene Family | AT5G58300 | 59.385 | 0.0 | 714 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Stsc30508g00008 | Pkinase | 2.6e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30508g00008 | - | - | var:108321341 | 865.144 |