Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30503g00013 ATGTTGTTACAGTTGGGACACATTCCAACTGTGGTGGTTTCATCAGCACTAGTAGTGAACGAAATCATGAAAGGCCACGACTCAGCACTCTCGAACCGAGCCCAAAGCACAGCCACCAATGCCTTGCTGTATGGATCCAATGACATTGGTTTTGCAAACTATGGAGAAAGTTGGAAGCAGAAAAGAAAGATATGCGTGCGTGAACTCTTGAGTCCTAAGATGGTTGAATCAGAATCGATTCGTTTGGTTAGAGAAGGTGCGGTTGCAGAACTGGTTGACAAGGTACGAGAAGCAGCTTCAAGAACATGCTCATCAGTGAATTTGAGTGAGTTGGTGGTTGAAGCAGCTAACAACATCATTTGTAACTCTGCTCTTGGACTAAAGAACGACGCAAAAGGTGTTCGTTGTAAAGATAGCGTGAAGAAGCTTGCAAAGAAGGTGATGTTTCAGGTTGGAGTTGTTACAATTGGGGATCACTTTCCATGGTTGAGTTGGGTTGATGTTGTCACTGGAAAGCTTCAACAATTCAAGAACACTTTTCAAGCCTTGGATCCCTTGTTTGATGAGATCATTGCTGAGCGAAGGAGTTCCATTATCAACAGAAGAGCTCATGATGATGATGATGATGATCAAAGAGATTTTGTAGACATCCTCATCCAACTCCAACAACAGCAGCCTGCCAATAATAATGCCTTTTCCAACATTGACATCAAATCAATTCTCCTGGACATGTTCGTAGCGGGAAGTGAGACAACTTCAGTAACAGTAGAGTGGGCAATGTCAGAGCTGATGAAGAATCCAGTTGAACTGAAAAAGGTACAGGAAGAGGTGAGAAGAGTTGTAGGGAAGAAATCAAATGTAGAAGACAACAAGGTGAAGGAAATGGAGTATCTAAAATGTGTGGTGAAAGAGACTCTAAGGTTGCATCCACCAGCACCTCTCTTGGCTCCAAGAGTGGCAAGAAGCCATGTGAAACTCAAAGGATACGACATCCCAGCAAAGACAAGATTGTACGTGAACGCATGGGCTATCCAGAGGGACCCTCAAGTGTGGGACAACCCGGAAGAGTTCATTCCAGAGAGGCATCGCCATAGTCACAACCACACTCAAGACTTTAAGCTTATTCCATTTGGTTTCGGTAGAAGAGGGTGCCCTGGAACGAATTTTGGCCTTGCTTCTGTTGAGTATATGCTTGCTAACCTTCTCTATTACTTCAACTGGGAATCTCAACAAGCACAAGCCATTGATATGAGTGAGATATTTGGCCTAGCTGCCTACAAAAGAATCCCTCTTCATCTTAAGCCTATTCCATTCTCATTCCAATAA 1326 0.4359 MLLQLGHIPTVVVSSALVVNEIMKGHDSALSNRAQSTATNALLYGSNDIGFANYGESWKQKRKICVRELLSPKMVESESIRLVREGAVAELVDKVREAASRTCSSVNLSELVVEAANNIICNSALGLKNDAKGVRCKDSVKKLAKKVMFQVGVVTIGDHFPWLSWVDVVTGKLQQFKNTFQALDPLFDEIIAERRSSIINRRAHDDDDDDQRDFVDILIQLQQQQPANNNAFSNIDIKSILLDMFVAGSETTSVTVEWAMSELMKNPVELKKVQEEVRRVVGKKSNVEDNKVKEMEYLKCVVKETLRLHPPAPLLAPRVARSHVKLKGYDIPAKTRLYVNAWAIQRDPQVWDNPEEFIPERHRHSHNHTQDFKLIPFGFGRRGCPGTNFGLASVEYMLANLLYYFNWESQQAQAIDMSEIFGLAAYKRIPLHLKPIPFSFQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30503g00013 441 Coils Coil 270 290 - -
Stsc30503g00013 441 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 377 386 IPR017972 GO:0005506|GO:0016705
Stsc30503g00013 441 PRINTS P450 superfamily signature 375 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS P450 superfamily signature 300 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PANTHER CYTOCHROME P450 71B11-RELATED 1 436 - -
Stsc30503g00013 441 Pfam Cytochrome P450 3 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 FunFam Predicted protein 245 433 - -
Stsc30503g00013 441 CDD CYP71-like 1 431 - -
Stsc30503g00013 441 Gene3D Cytochrome P450 1 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 SUPERFAMILY Cytochrome P450 2 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS E-class P450 group I signature 236 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS E-class P450 group I signature 340 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS E-class P450 group I signature 384 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS E-class P450 group I signature 115 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS E-class P450 group I signature 256 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS E-class P450 group I signature 299 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30503g00013 441 PRINTS E-class P450 group I signature 374 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30503g00013 Stsc-Chr30503 47349 49140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30503g00013 1 435 Cytochrome P450 AT4G13290 39.910 1.05e-103 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30503g00013 K20617 - gmx:100785621 496.508