Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30501g00011 ATGAAAACTGAGGCAATTGTAAGGGAGAAGGCAAGCATGGAAGTGGAACAGCCACCAGCAGCAGGAGGAGGAGGAGGATTCAACAATGGAAACCAGTCATCAGAAGAACAAAAATTCAGTGTGCCAGTGGATTCAGAGAACAAGGCAACAGAATTCAGACTCTTCTCCATATCCAAACCACACATGAGAGCATTCCACCTCTCATGGATCTCCTTCTTCTCATGCTTTGTCTCCAGCTTTGCAGCACCACCACTTCTCCCTATCATCCGGGACAATCTCAACCTCACCGCAACTGACATCGGCAATGCCGGAGTCGCCTCAGTCTCCGGCGCCGTCTTCGCAAGAGTAGCCATGGGGACAGCCTGCGATTTGGTCGGCCCTCGCCTCGCCTCCGCCTCCCTCATCTTCCTAACAGCACCAGCAGTGTACTTCACCTCAGTCATCAACTCCGCCACCTCCTACCTCCTTGTCCGCTTCTTCACCGGATTCTCCTTAGCTACCTTCGTCTCCACGCAATTCTGGATGAGTTCCATGTTCTCTCCCCCTGTTGTAGGCAGAGCAAACGGATTCGCCGGCGGTTGGGGGAACCTTGGAGGAGGGGCAACCCAACTCATCATGCCATTAGTCTTTTCCCTCATCCGAGACATCGGCGCCGCGCAATTCACGGCTTGGAGGATCGCATTCTTTGTCCCTGCATTCTTTCAAATGCTAACAGCATTCTCTATATTGATATTTGGACAGGACATGCCCGATGGCAACTTCCAGAGGCTAAAGAAGTCAGGGGAGAAACCCAAAGATGAATTCTCAAAGGTTCTTTTCCATGGTGTTTCAAACTATAGAGGCTGGATTCTGGCGTTGACTTATGGATACTGCTTTGGTGTGGAGTTGACTATTGATAACATCATAGCTGAGTACTTCTATGACAGATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCGAGTTTCGGGTTGGCGAATCTGTTCTCTAGGCCTGGTGGAGGCATGTTATCTGATGCAGTTTCAAGGAGGTTTGGAATGAGGGGTAGGCTTTGGGCCTTGTGGCTTTGCCAAACATTTGCTGGTGTCTTGTGCATAATTCTTGGACTTGTTGGATCTTTGAGTGTTTCGGTTGTTGTTATGATCATATTCTCTGTGTTTGTTCAAGCTGCTTGTGGCATGACCTTTGGAATTGTTCCTTTTGTCTCAAGAAGGTCATTAGGAGTGATATCAGGAATGACAGGAGGAGGAGGGAATGTGGGTGCAGTTGTGACCCAACTAATATTCTTCAAAGGATCAAGATTCTCAAAAGAGAGGGGAATAACACTAATGGGTGTGATGATCATAATATGCACACTCCCAATATGTCTAATATATTTCCCACAGTGGGGTGGCATGTTCTTTGGTCCTTCATCAAAGAAAGTTACAGAAGAAGATTACTACTTGGGTGAGTGGAACTCAAAGGAGCAAGAGAAAGGCTCACACCATGCAAGCATGAAGTTTGCTGATAATAGTGTCAGTGAGAGAGGCAGAAGACTCAACACTTCAACTAGGCCTGCTGATGAATCAACACCGTCACCAACACATGTTTGA 1596 0.4774 MKTEAIVREKASMEVEQPPAAGGGGGFNNGNQSSEEQKFSVPVDSENKATEFRLFSISKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARVAMGTACDLVGPRLASASLIFLTAPAVYFTSVINSATSYLLVRFFTGFSLATFVSTQFWMSSMFSPPVVGRANGFAGGWGNLGGGATQLIMPLVFSLIRDIGAAQFTAWRIAFFVPAFFQMLTAFSILIFGQDMPDGNFQRLKKSGEKPKDEFSKVLFHGVSNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANLFSRPGGGMLSDAVSRRFGMRGRLWALWLCQTFAGVLCIILGLVGSLSVSVVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSRFSKERGITLMGVMIIICTLPICLIYFPQWGGMFFGPSSKKVTEEDYYLGEWNSKEQEKGSHHASMKFADNSVSERGRRLNTSTRPADESTPSPTHV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30501g00011 531 MobiDBLite consensus disorder prediction 509 531 - -
Stsc30501g00011 531 Gene3D MFS general substrate transporter like domains 266 465 IPR036259 -
Stsc30501g00011 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 30 513 IPR044772 GO:0015112
Stsc30501g00011 531 FunFam High affinity nitrate transporter 2.5 57 253 - -
Stsc30501g00011 531 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Stsc30501g00011 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 464 IPR020846 GO:0022857
Stsc30501g00011 531 MobiDBLite consensus disorder prediction 1 44 - -
Stsc30501g00011 531 MobiDBLite consensus disorder prediction 26 44 - -
Stsc30501g00011 531 Gene3D MFS general substrate transporter like domains 56 255 IPR036259 -
Stsc30501g00011 531 MobiDBLite consensus disorder prediction 490 531 - -
Stsc30501g00011 531 FunFam Nitrate transporter 2.1 265 466 - -
Stsc30501g00011 531 SUPERFAMILY MFS general substrate transporter 50 460 IPR036259 -
Stsc30501g00011 531 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30501g00011 Stsc-Chr30501 53157 55996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30501g00011 13 520 Inorganic Solute Cotransporters AT1G12940 72.244 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30501g00011 K02575 - gmx:100787888 839.721