Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30499g00007 ATGGCCAAGGAGAATCAGCATATAATCTTGGATGATGATTATGAGAAAAAGATTATTCGTAGGGAAGTTGAAAGACGAAGGAGGACAGGAATGTCTACTCTCTCTGCATCACTCCGCTCTTTACTCCCGTTTCACCTCATCAAGAAAATTGAAACACTTGAGTTCAAGAGAGATAGACTACTCAAACAGAAACAGCTGACGGTTGATGATGAGATGAATATTATTCCAGAATCATCAGATCATAGAAGAAGTGATAATTGTGTCAGTGTCAACCTCGTTCCTGGCGGCTTGGAAATTGATATATGTGTTACTGATGATTGGTTTTTATCAGACTTAATTTCTATACTGCTTCAACAAGGCTGCCATGTTGACATGTTGTTAGCTGCGTTTCCTCTCAAGTCAATGGCACAACCTTTCATTCTCTTCTCTCTCAAGTGGAGGACTTGA 447 0.3982 MAKENQHIILDDDYEKKIIRREVERRRRTGMSTLSASLRSLLPFHLIKKIETLEFKRDRLLKQKQLTVDDEMNIIPESSDHRRSDNCVSVNLVPGGLEIDICVTDDWFLSDLISILLQQGCHVDMLLAAFPLKSMAQPFILFSLKWRT 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30499g00007 148 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 55 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30499g00007 Stsc-Chr30499 37735 39558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30499g00007 11 48 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 55.263 7.38e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30499g00007 - - gmx:100776724 83.9593