Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30498g00002 ATGGATAATCCATATAATAATGTTGAATGGGTACTCTCCGGAATGCTAAATCAACCAAAAACACTTCAAAAGGCTACCAAAGAATTGGACAATGTGGTAGGAAAAGAGAGAATAGTACAAGAATCTGACATTCCAAAGCTCAACTATGTGAAGATTGTTGCCAATTACTTCATTCCAAAGGGTAGCCATGTTCTTATTAGGAGGCAAGGTGTTGGCCAAAACCCTAGAGTTTGGGAAGAGCCATTGAAATTTAAACCCGAAAGACATTTGGAGAAAAATGGATGTGATCTGACTTTGGTTGAGCCAAATTTGGAGTTGTTCACATTCGGCATTGGAAGAAGAAGTTGCCCTGCAATCACACTTGGGACTACAGTGACTGTAATGCTCTTTGCAAGGTTGGTTCATGGATTCACTTGGATTCCACCTCCCAACGAACCGATCATTGATCTCTCTGAACTTGAAAGTAACACTACAAAAGCTAAGCCACTAGTTGCACTGGGAAAGCCAAGATTACCTGCCAAAGTTTATCATCAATTGAATTAA 543 0.3996 MDNPYNNVEWVLSGMLNQPKTLQKATKELDNVVGKERIVQESDIPKLNYVKIVANYFIPKGSHVLIRRQGVGQNPRVWEEPLKFKPERHLEKNGCDLTLVEPNLELFTFGIGRRSCPAITLGTTVTVMLFARLVHGFTWIPPPNEPIIDLSELESNTTKAKPLVALGKPRLPAKVYHQLN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30498g00002 180 Gene3D Cytochrome P450 53 168 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30498g00002 180 Gene3D Cytochrome P450 2 52 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30498g00002 180 PRINTS E-class P450 group I signature 8 34 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30498g00002 180 PRINTS E-class P450 group I signature 116 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30498g00002 180 PRINTS E-class P450 group I signature 67 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30498g00002 180 PRINTS E-class P450 group I signature 106 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30498g00002 180 PANTHER CYTOCHROME P450 98A9 53 177 - -
Stsc30498g00002 180 Pfam Cytochrome P450 53 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30498g00002 180 SUPERFAMILY Cytochrome P450 6 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30498g00002 Stsc-Chr30498 4718 5334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30498g00002 1 176 Cytochrome P450 AT5G05260 46.269 7.88e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30498g00002 - K12153 ahf:112723966 286.96