Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30486g00001 ATGCAGATGGGACAACGCACCATGATCATTGTCACCAGCTCCGACCTCATCCACGAGGCACTCGTCCAGAGGGGCCCCTTGTTCGCCAGCAGGCCCAAGGACTCCCCGATTCGACTCATCTTCAGCATGGGAAAGTGCGCCATCAACTCCGCCGAGTACGGTCCCGTGTGGCGTTCTCTGCGTCGCAACTTCGTGACAGAGATGATCACCCCGTTGAGGATAAAGCAGTGCAGCTGGATTCGGAAATGGGCCATGGAGGCCCATATGAGTAGGATCCAGGTAGAGGCACGTGAGAAAGGCGTGGTTGAAGTGATGAGCAACTGCAGGCTCACCATATGCAGCATCCTCATCTGTCTCTGTTTCGGTGCTAAGATCACAGAGGACAGAATCAGAAGCATCGAGAGCATCTTGAAGGACGTTATGCTCATCACTCTTCCCAAGCTTCCAGACTTCTTGCCCATTCTCACTCCCTTGTTCCGCCCTCAGGTGAGGGAGGCGAAGAGGCTGAGGCAGAAGCAGGTGGAGCTGTTGGTACCGTTGATAAGGAGCAGGAGAACTTACGTGGAGAGCGGTGGGAAGGATGGCGGTGCTGAGATGGCGAGTCCGGTCGGCGCTGCCTACGTCGACTCGCTCTTCACTTTGGACGTTCCCGGACGGGGGAGGCTGGGGGAGGAGGAGCTCGTCACGCTGGTCTCGGAGGTCATAAGCGCCGGTACGGACACGAGCGCCACGGCGGTGGAATGGGCCATGTTCCACTTGGTGACGGACCAGGGGATTCAGGAGAAGCTGTACGGCGAGATTGTGGAGTGCGTGGGGAAAAACGGCGTCGTTATGGAGAGTGACGTGGAGAAGATGACGTACCTGTGCGCGGTGGTGAAGGAGACTTTCCGGCGTCACCCTCCGAGCCACTTCGTGCTGTCCCACGCTGCGACGGAGGTTACGGAGTTGGGAGGGTACACGGTGCCGAAGGAGGCGAGCGTGGAGTTTTATACGGCGTGGTTGACAGAGGATCCGAAAATGTGGTCGGATCCGGGTGAGTTCCGACCCGAGAGGTTCTTGAACGGAGATGGGGTTGAGGTGGATATTACGGGAACAAAAGAGGTTAAGATGATGCCGTTTGGGGCTGGGAGGAGGATCTGTCCCGCTTGGACTCTTGGGACGCTTCACATTAACATGTTGCTGGCCCGAATGGTTCATGCTTTTAAGTGGGTGCCCGCTCCAAATATACCACCACCCGACCCGACTGAGACCTTCGCTTTTACTATTGTCATGAAGAACCCTCTCAAGGCTCTTATTCTCCCTAGGTCTATTTAG 1314 0.5662 MQMGQRTMIIVTSSDLIHEALVQRGPLFASRPKDSPIRLIFSMGKCAINSAEYGPVWRSLRRNFVTEMITPLRIKQCSWIRKWAMEAHMSRIQVEAREKGVVEVMSNCRLTICSILICLCFGAKITEDRIRSIESILKDVMLITLPKLPDFLPILTPLFRPQVREAKRLRQKQVELLVPLIRSRRTYVESGGKDGGAEMASPVGAAYVDSLFTLDVPGRGRLGEEELVTLVSEVISAGTDTSATAVEWAMFHLVTDQGIQEKLYGEIVECVGKNGVVMESDVEKMTYLCAVVKETFRRHPPSHFVLSHAATEVTELGGYTVPKEASVEFYTAWLTEDPKMWSDPGEFRPERFLNGDGVEVDITGTKEVKMMPFGAGRRICPAWTLGTLHINMLLARMVHAFKWVPAPNIPPPDPTETFAFTIVMKNPLKALILPRSI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30486g00001 437 Pfam Cytochrome P450 2 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 CDD CYP77_89 1 429 - -
Stsc30486g00001 437 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 427 - -
Stsc30486g00001 437 PRINTS E-class P450 group I signature 330 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS E-class P450 group I signature 16 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS E-class P450 group I signature 111 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS E-class P450 group I signature 370 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS E-class P450 group I signature 380 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS P450 superfamily signature 371 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 Gene3D Cytochrome P450 1 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30486g00001 437 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 373 382 IPR017972 GO:0005506|GO:0016705
Stsc30486g00001 437 SUPERFAMILY Cytochrome P450 2 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30486g00001 Stsc-Chr30486 7847 9297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30486g00001 1 436 Cytochrome P450 AT1G11600 70.776 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30486g00001 K21995 - gmx:100783249 737.643