Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30484g00009 ATGAGAACAATCACTTCAAGAGACAGTTTAGAAGTAGGCCAATCTATCCAAGATGGTGAGACTTTGGTTTCTGCTGGTGGAAGCTTTGAATTGGGTTTCTTTAGTCCTGGGATTCCAACAAATAGATACTTAGGTGTGTGGTACAGAGATTCATCAGGGAATTCAACAGTTGTGTGGGTAGCAAACAGAGACATACCAATTCAAAGCAAATCATCAAGTGTTTTGAAACTCACAGAGAATGGGATTCTTCAGCTTCTGAATGGCAGCACTAACAGCAACATTTGGTCTTCCAACACCACAGGCAAAGCTTCGGGCGGCTCGATTGCGAAGCTCTTGGATTCGGGGAATCTTGTAGTACAAAATGGACAAAGTACTGAGGAGGAAAACTTTTTGTGGCAAAGTTTTGATTATCCATGTGATACAGCGATGCCAGGAATGAAGCTTGGATTGAACTTTGTTACTGGTTTTGAGAGATCTTTGTCATCTTGGAAAAGTGCAGAGGATCCTGCTGTAGGAGAATATTCTATGAAGATTGATCCTAGAGGGTATCCACAAGTAATGGAATTCAAAGGATCTGTTAAATATTTCCGAACTGGGCCATGGAATGGCCTTTATTTTCCTGGATATCTAACCCCGGCAGATCATAGACAACAATTTGTACTGGACAAAACCCAGGTGTATTCTGAGTTTGAAATACTTGATAAATCCCTTTTCTTCCTGCATAAACTACAACCTTCAGGTAATAATATAGGTACTGTTTGGAAGAAATATGAAACAAGAACTGAGGTGGCAGGTGTGGCAGTTCCCACAATTAATGGATACAATGGGTGTGGAAGTTATGCCTTTTGTGGTTCAAATGCTATATGCATGGTTGATACTAGCCTTCCAACATGTCAATGCCTAAAAGGATATGTTCCCAAGTTTCCCCAACAATGGGATATGTTAAATTGGTCTGATGGTTGTGTTAGGAAGAGTTCATTGGATTGTAATAACACTAACAGCTTCTTAAGGTACTCAGAAATAAAAGTGCCGGACACTTCATCCTCATGGTATAATCAGACCATGAATCTTGAAGAATGTAAACAATTGTGCCTAAAGAACTGTTCTTGTGTTGCATATGCAAATTTGGATATCAGTAATGGAGGAAGTGGCTGCCTTCTTTGGTTTGATAATCTTATTGACATGGTACAATTCTCAAGTGCTGGTCAAGACATTTACATCAGAGTCCCTCCTTCAGAATTAGGTAATGACCATGGAAATTTGAAGAAAAAGAAGGTGGCAATTGCAGTTGGTGTGATCATTTTTGGACTGATCACATGTGTTAGCATAGTGATAATAAAAAAATCTGGAGTTGCAAGAATAATTCAAAGAAATAGGCAAAGACCGAAGGTCACTGAGCTACCAACATTTGATTTCTCAGTCTTAGTTAAAGCAACAGAGAACTTTTCAAGTAGTAACAAAATTGGAGAAGGTGGTTTTGGATCAGTATACATGGCTACACTAACAAATGGCCAAGAGATAGCTGTAAAAAGGCTTTCAAAAAAGTCTACACAAGGTTTAGAAGAGTTTAAAAATGAAGTGTTGTTGATAGCTAAACTTCAACATCGTAATCTTGTAAAGCTTCTTGGTTGTTGCATTCAAGGAGCAGAAAAATTATTGGTTTATGAATATATGCCGAACAAAAGCTTAGACTACTTTGTTTTCGATGAAGTCAGAAAAAAGATGCTAGATTGGATTAAGCGTTTCAACATTATTGATGGCATTGCTCGGGGACTTCTTTATCTCCATCAAGATTCTAGATTGAGGATTATTCACAGAGATTTAAAAACTAGTAATATTCTACTGGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCCTAGCTCGGACATTCTTAGGCGATCAACTAGAGGCTAACACAAACAGAGTAGCCGGAACATAG 1944 0.3832 MRTITSRDSLEVGQSIQDGETLVSAGGSFELGFFSPGIPTNRYLGVWYRDSSGNSTVVWVANRDIPIQSKSSSVLKLTENGILQLLNGSTNSNIWSSNTTGKASGGSIAKLLDSGNLVVQNGQSTEEENFLWQSFDYPCDTAMPGMKLGLNFVTGFERSLSSWKSAEDPAVGEYSMKIDPRGYPQVMEFKGSVKYFRTGPWNGLYFPGYLTPADHRQQFVLDKTQVYSEFEILDKSLFFLHKLQPSGNNIGTVWKKYETRTEVAGVAVPTINGYNGCGSYAFCGSNAICMVDTSLPTCQCLKGYVPKFPQQWDMLNWSDGCVRKSSLDCNNTNSFLRYSEIKVPDTSSSWYNQTMNLEECKQLCLKNCSCVAYANLDISNGGSGCLLWFDNLIDMVQFSSAGQDIYIRVPPSELGNDHGNLKKKKVAIAVGVIIFGLITCVSIVIIKKSGVARIIQRNRQRPKVTELPTFDFSVLVKATENFSSSNKIGEGGFGSVYMATLTNGQEIAVKRLSKKSTQGLEEFKNEVLLIAKLQHRNLVKLLGCCIQGAEKLLVYEYMPNKSLDYFVFDEVRKKMLDWIKRFNIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQLEANTNRVAGT 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30484g00009 647 Gene3D Phosphorylase Kinase; domain 1 446 557 - -
Stsc30484g00009 647 Pfam PAN-like domain 329 395 IPR003609 -
Stsc30484g00009 647 Pfam D-mannose binding lectin 56 164 IPR001480 -
Stsc30484g00009 647 SMART serkin_6 482 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30484g00009 647 CDD PAN_AP_plant 327 410 - -
Stsc30484g00009 647 ProSitePatterns Protein kinases ATP-binding region signature. 488 510 IPR017441 GO:0005524
Stsc30484g00009 647 SUPERFAMILY Protein kinase-like (PK-like) 462 647 IPR011009 -
Stsc30484g00009 647 Pfam S-locus glycoprotein domain 196 308 IPR000858 GO:0048544
Stsc30484g00009 647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 135 - -
Stsc30484g00009 647 ProSiteProfiles Bulb-type lectin domain profile. 7 132 IPR001480 -
Stsc30484g00009 647 ProSiteProfiles Protein kinase domain profile. 482 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30484g00009 647 Pfam Protein kinase domain 483 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30484g00009 647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 447 557 - -
Stsc30484g00009 647 SMART ntp_6 330 409 IPR003609 -
Stsc30484g00009 647 CDD B_lectin 14 138 IPR001480 -
Stsc30484g00009 647 Gene3D - 3 135 IPR036426 -
Stsc30484g00009 647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 328 409 - -
Stsc30484g00009 647 ProSiteProfiles PAN/Apple domain profile. 329 410 IPR003609 -
Stsc30484g00009 647 SMART blect_4 13 138 IPR001480 -
Stsc30484g00009 647 Gene3D Hepatocyte Growth Factor 326 406 - -
Stsc30484g00009 647 Gene3D Transferase(Phosphotransferase) domain 1 558 647 - -
Stsc30484g00009 647 ProSiteProfiles EGF-like domain profile. 273 310 IPR000742 -
Stsc30484g00009 647 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 637 - -
Stsc30484g00009 647 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 203 IPR036426 -
Stsc30484g00009 647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 558 647 - -
Stsc30484g00009 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30484g00009 Stsc-Chr30484 52284 54872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30484g00009 355 647 Receptor kinase-like Gene Family AT4G23220 46.926 1.23e-79 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc30484g00009 Pkinase 2.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30484g00009 - - adu:107464241 1082.78