Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30484g00008 ATGCCTCCGGAGTATGCAGTACATGGACAATATTCAATGAAGTCTGATGTTTTTAGCTACGGTGTCATAGTACTAGAATTGATAAGTGGGAAGAAGAATAGAGAATTCTCAGATCCAGAAAACTACCTTAATCTTCTTGGACACGCATGGAGATTATGGACTGATGAGAAGCCATTGGAACTGCTAGATGAAGTGTTAAAGGAAGGATGCACAGCACCTGAAGTAGAAAGATGCATTCAAGTGGGTTTGTTATGTGTGCAACAAAGACCAGAAGATAGGCCAGACATGTCATCAGTGGTTCTAATGTTGAAGGGTGAGAAACTACTGCCCAAGCCAAAGGTTCCTGATAATAGCCATGGAAATACAAATAAAAAGAAGATAGGCATTGCAGTTGGTGTGAGTATTTTCGGATTAGCCACATCCATCGCCATAATAACAATAATTAGAAATCCAGCAAGAATACTTTACAGACATAAGCAAAGACAGGAAGATATCAACCTACCAAAATTTGATTTCTCAGTCTTAGCCAAAGCCACTGAAAAGTTCTCAAGAAATAATAAACTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGCATGATGATAGGTGGGCAAGAGATAGCTGTGAAAAGACTTTCTAAAAAATCCGGGCAAGGGTCGGAAGAGTTCAAGAATGAAATGATGTTGATAGCTAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGATACTGCATTCAAGGAGAAGAAAAAATAATTTATGAGTATATGCCTAACAAAAGCTTGGACTAG 792 0.3902 MPPEYAVHGQYSMKSDVFSYGVIVLELISGKKNREFSDPENYLNLLGHAWRLWTDEKPLELLDEVLKEGCTAPEVERCIQVGLLCVQQRPEDRPDMSSVVLMLKGEKLLPKPKVPDNSHGNTNKKKIGIAVGVSIFGLATSIAIITIIRNPARILYRHKQRQEDINLPKFDFSVLAKATEKFSRNNKLGEGGFGPVYKGMMIGGQEIAVKRLSKKSGQGSEEFKNEMMLIAKLQHRNLVKLLGYCIQGEEKIIYEYMPNKSLD 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30484g00008 263 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 148 256 - -
Stsc30484g00008 263 SUPERFAMILY Protein kinase-like (PK-like) 167 263 IPR011009 -
Stsc30484g00008 263 ProSiteProfiles Protein kinase domain profile. 182 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30484g00008 263 SUPERFAMILY Protein kinase-like (PK-like) 1 108 IPR011009 -
Stsc30484g00008 263 Pfam Protein tyrosine and serine/threonine kinase 185 262 IPR001245 GO:0004672|GO:0006468
Stsc30484g00008 263 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Stsc30484g00008 263 Gene3D Phosphorylase Kinase; domain 1 155 256 - -
Stsc30484g00008 263 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30484g00008 263 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Stsc30484g00008 263 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 121 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30484g00008 Stsc-Chr30484 50288 52208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30484g00008 169 263 Receptor kinase-like Gene Family AT4G23140 60.417 8.26e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc30484g00008 PK_Tyr_Ser-Thr 6.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30484g00008 - - cave:132174511 282.722