Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30484g00007 ATGTCTCCTGAGTATGCAGTGCACGGACACTTCTCATTAAAATCTGATGTATTTAGCTACGGTGTAATAGTACTAGAGTTGGTAAGTGGGCTAAAAAACAGGGAATTCTTGGACCCAGAAAACATTCTTAATCTTCTTGGACATGCATGGCAATTATGGACTGATGAGAGGCCATTAGAACTATTGGATGAAGAGTTAAAGGGAAGGATGCGCCCCTTTCGAAGTCATACGGTGCATACAAGTGGGTCTGTTATGTGTGCAACAAAGACCAGAAAATAG 279 0.4158 MSPEYAVHGHFSLKSDVFSYGVIVLELVSGLKNREFLDPENILNLLGHAWQLWTDERPLELLDEELKGRMRPFRSHTVHTSGSVMCATKTRK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30484g00007 92 Gene3D Transferase(Phosphotransferase) domain 1 1 92 - -
Stsc30484g00007 92 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 67 - -
Stsc30484g00007 92 SUPERFAMILY Protein kinase-like (PK-like) 1 74 IPR011009 -
Stsc30484g00007 92 Pfam Protein tyrosine and serine/threonine kinase 1 48 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30484g00007 Stsc-Chr30484 49675 50045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30484g00007 1 71 Receptor kinase-like Gene Family AT4G05200 49.296 3.45e-23 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc30484g00007 PK_Tyr_Ser-Thr 2.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30484g00007 - - aip:107614884 117.857