Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30484g00006 | ATGGCCATGGACAATTTAAGAACGTTACTTATATGGTTCTTTCTCATGGCCTGCATGAGAACCACTACTTCATCAGACAGCCTAGGAATTGTTCAATATATCCGAGATGGCGAATCTCTAGTCTCAGCTGGTGGAAGCTTTGAACTTGGTTTCTTCAGCCCCGGAACTTCGACAAATCGATATTTGGGTGTGTGGTACAGAGATACATCAGGGAATCCAACAGTTGTTTGGGTGGCTAACAGAGAAAGACCCCTTCACAACAAGTCAGGAGTTTTGCAACTCAACAAAATGGGGATTCTTCAGCTTCTTGATGAGACAAACAACACTGTTTGGTCATCCAACATATCCAGCAAATCATGGAGTAACTCAGTTGCAAGGATTTTGGATTCAGGTAATCTTGTAGTGACAAATGGACAAGATACTTATAACAGCAGCTTTTTGTGGCAGAGTTTTGATTACCCTTGTGACACATTGATGCCTGGAATGAAAATTGGATGGAACTTTGTTACTGGTCAAGAAAAATATATATCAAGCTGGAAAAGTGAAGAAGATCCTGCTGTGGGAGAGTATGCTATAAAACTTGATCCTAGAGGGTATCCACAAATAATGATAATGAAGGGATCTCTTATATATTTCAGAGGTGGATCATGGAATGGTCTTTACTTTACAGGATCTCCATCTCAGAACACACAAACATTTAAATCCAATTTTGTATTGAATGGAAAAGAGGTGTATTATGATTTTGAAATGCTTGATACTTCCATTTTCACAGTACTTAAAGAATACTCTTCAGGTGATGGACAATATCTTGTTTGGACAAGCCAAACAAGAAACAAGGTGCAAGCTACCGAGGTTTCGAACCAAGGAGGGTGTGACAGGTATGCCTATTGTGGTTCAAATTCTATATGCATTGTGGATAGTAATGTTGCAATATGCAAATGTCTGAAAGGATATATTCCCAATCCCAAGCTTTCTAAACAAGAAAATATGTCATATTGGTCCAATGGTTGTGTTAGAAAGGATGCATTGGATTGTAATAACACTGATGGCTTCTTGAGCTACACAGGCATAAAATTGCCAGACACGTCTTCTTCATGGTATAGTGAGACAATGAACCTCCAGGAATGTCAAAAGTTTTGCCTGAAAAATTGTTCTTGTTCAGCATATTCAAGTTTGGATATTCGTAATGGTGGAAGTGGTTGTCTAATTTGGTTTGATAATCTTACTGACATTATACAATTCTCACAAGGGGGTCAAGAATTTTACCTGAGAGTCCCTTCTTCAGAATTGGGGGCAACGAAAATAATTTACAGAGAAAAACAAATGCAAGAAGATATTGATCTACCAGCATTCAATTTCTCAGTCTTAGCTAAAGCTACAGAAAACTTTTCAAGCAGTAACAAACTTGGAGAAGGAGGTTTTGGAGAAGTATACAAGGGTACATTGACTGGTGGTCAAGAGTTAGCTCTAAAAAGACTTTCAAAAAAGTCCGGCCAAGGGTTGGAAGAGTTCAAAACCGAAGTAGCGTTGATAGCGAAACTTCAACATCGTAATCTTGTAAAGCTTCTTGGTTTTTGCATTCAAGGAGTAGAAAAGATATTGGTCTATGAATACATGCCGAACAAAAGCCTCGACTACTTCATTTCTGATGAGATTAGAAGGAAGTTGCTAGATTGGCCTAAACGTTTCAACATTATTAGCGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGACTAAGGATTATTCATAGAGACCTAAAAACGAGCAATATTTTGCTAGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCTTGGCTCGAACATTCTTAGGTGATCAATTGGAGGCTAACACAAATAGGATAGCTGGAACATATGGTTACATGCCTCCTGAGTATGCAGTACACGGTCAATTCTCAATGAAGTCTGATGTGTTTAGCTATGGTGTGATAGTACTAGAGTTGTTAAGTGGGAAGAAGAACAGGGAATTCTCCGACCCGGAAAACTACCTTAATCTTCTTGGACATGCATGGAGATTATGGAATGAAGAGAGGCCATTGGAGCTATTGGATGAATTGTTAAAGGAAGGATCATGCACTCATTCTGAAGTCATAAGATGCATACAAGTGGGGCTACTATGTGTGCAACAAAGACCAGAAGATAGACCAGACATGTTATCTGTGGTTCTAATGCTAAATGGTGAGAAATTGCTACCCAAGCCACAGGTCCCTGGTTTTTATATTGAAAGAGGTGTTACAATTGAAGCAGATACAATGTTGGGAAATGGCACACCATTTTCAGCCAATGAAATTTCCATGACATTGTTAGAAGCAAGATAG | 2349 | 0.3874 | MAMDNLRTLLIWFFLMACMRTTTSSDSLGIVQYIRDGESLVSAGGSFELGFFSPGTSTNRYLGVWYRDTSGNPTVVWVANRERPLHNKSGVLQLNKMGILQLLDETNNTVWSSNISSKSWSNSVARILDSGNLVVTNGQDTYNSSFLWQSFDYPCDTLMPGMKIGWNFVTGQEKYISSWKSEEDPAVGEYAIKLDPRGYPQIMIMKGSLIYFRGGSWNGLYFTGSPSQNTQTFKSNFVLNGKEVYYDFEMLDTSIFTVLKEYSSGDGQYLVWTSQTRNKVQATEVSNQGGCDRYAYCGSNSICIVDSNVAICKCLKGYIPNPKLSKQENMSYWSNGCVRKDALDCNNTDGFLSYTGIKLPDTSSSWYSETMNLQECQKFCLKNCSCSAYSSLDIRNGGSGCLIWFDNLTDIIQFSQGGQEFYLRVPSSELGATKIIYREKQMQEDIDLPAFNFSVLAKATENFSSSNKLGEGGFGEVYKGTLTGGQELALKRLSKKSGQGLEEFKTEVALIAKLQHRNLVKLLGFCIQGVEKILVYEYMPNKSLDYFISDEIRRKLLDWPKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQLEANTNRIAGTYGYMPPEYAVHGQFSMKSDVFSYGVIVLELLSGKKNREFSDPENYLNLLGHAWRLWNEERPLELLDELLKEGSCTHSEVIRCIQVGLLCVQQRPEDRPDMLSVVLMLNGEKLLPKPQVPGFYIERGVTIEADTMLGNGTPFSANEISMTLLEAR | 782 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30484g00006 | 782 | CDD | PAN_AP_plant | 343 | 426 | - | - | |
Stsc30484g00006 | 782 | SMART | blect_4 | 31 | 154 | IPR001480 | - | |
Stsc30484g00006 | 782 | PIRSF | SRK | 431 | 782 | IPR024171 | GO:0004674 | |
Stsc30484g00006 | 782 | PIRSF | SRK | 1 | 445 | IPR024171 | GO:0004674 | |
Stsc30484g00006 | 782 | SUPERFAMILY | Protein kinase-like (PK-like) | 446 | 735 | IPR011009 | - | |
Stsc30484g00006 | 782 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 584 | 596 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc30484g00006 | 782 | ProSiteProfiles | Bulb-type lectin domain profile. | 25 | 148 | IPR001480 | - | |
Stsc30484g00006 | 782 | Gene3D | - | 20 | 151 | IPR036426 | - | |
Stsc30484g00006 | 782 | ProSiteProfiles | PAN/Apple domain profile. | 345 | 427 | IPR003609 | - | |
Stsc30484g00006 | 782 | Gene3D | Transferase(Phosphotransferase) domain 1 | 539 | 741 | - | - | |
Stsc30484g00006 | 782 | CDD | STKc_IRAK | 469 | 737 | - | - | |
Stsc30484g00006 | 782 | ProSitePatterns | Protein kinases ATP-binding region signature. | 469 | 491 | IPR017441 | GO:0005524 | |
Stsc30484g00006 | 782 | SMART | serkin_6 | 463 | 733 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30484g00006 | 782 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 429 | 538 | - | - | |
Stsc30484g00006 | 782 | Pfam | Protein tyrosine and serine/threonine kinase | 466 | 731 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc30484g00006 | 782 | ProSiteProfiles | Protein kinase domain profile. | 463 | 741 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30484g00006 | 782 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 75 | 185 | IPR036426 | - | |
Stsc30484g00006 | 782 | FunFam | - | 539 | 744 | - | - | |
Stsc30484g00006 | 782 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 9 | 722 | - | - | |
Stsc30484g00006 | 782 | Pfam | D-mannose binding lectin | 74 | 180 | IPR001480 | - | |
Stsc30484g00006 | 782 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 20 | 151 | - | - | |
Stsc30484g00006 | 782 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 344 | 425 | - | - | |
Stsc30484g00006 | 782 | CDD | B_lectin | 31 | 154 | IPR001480 | - | |
Stsc30484g00006 | 782 | Gene3D | Phosphorylase Kinase; domain 1 | 429 | 538 | - | - | |
Stsc30484g00006 | 782 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | - | - | |
Stsc30484g00006 | 782 | Pfam | S-locus glycoprotein domain | 212 | 321 | IPR000858 | GO:0048544 | |
Stsc30484g00006 | 782 | Pfam | PAN-like domain | 345 | 411 | IPR003609 | - | |
Stsc30484g00006 | 782 | Gene3D | Hepatocyte Growth Factor | 341 | 423 | - | - | |
Stsc30484g00006 | 782 | SMART | ntp_6 | 346 | 425 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30484g00006 | Stsc-Chr30484 | 44656 | 48295 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30484g00006 | 451 | 782 | Receptor kinase-like Gene Family | AT4G23140 | 56.851 | 1.79e-128 | 397 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc30484g00006 | PK_Tyr_Ser-Thr | 1.3e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30484g00006 | - | - | aip:107614884 | 1472.22 |