Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30480g00003 ATGGCTACACCAAATCCACAAGCAGCTGCAGCAGCAGTATGTCCACCACCAATGAAGGCCACGTCCAATGGGGCTTTCCACCATGAAAATCCTCTTGACTATTCTCTTCCATTGCTGATTGTTCAAATATGCATCGTTGTTTGCTTCACTAGACTCCTTGCATTCATTTGCAGACCTCTTAGACAGCCTAGAGTTATTGCAGAGATCATCGGAGGATTACTGCTAGGACCATCTGCCTTTGGAAGAAACCAGAAGTTTCTAGACACAATTTTCCCAAAGAAGAGCTTAACAGTTCTTGACACCATAGCCAACGTGGGTCTATTGTTCTTCTTGTTTCTCGTTGGTCTTGAGCTTGATGTCCGTTCCATTAGGCGCACTGGTCCAAAGGCCTTAGCCATTGCAGTGTGTGGCATCACTTTCCCTTTCACTCTCGGCGTTGGAACCTCTTTTGTTCTCAGAGCAACCATCTCCAAAGGTGTTCAGCCACTCGCCTTCATTGTCTTCATGGGCGTGGCTCTCTCCATCACTGCTTTCCCTGTCTTGGCTCGAATCCTCGCCGAGCTCAAGCTTCTCACAACTGATGTTGGAAGCATTGCCATGTCTGCTGCTGCTGTGAATGATGTTGCAGCATGGATTCTCTTAGCTCTTGCAATAGCTATATCCGGTGAAAACACTTCACCACTCATATCTGTCTGGGTTATGCTTTGTGGTGCTACTTTTATAGTCTTCGCTGTGTATGCCATAAGACCATTGCTGGTGATAATGGCGAAGCGTTCGCTATCAGGGGAGCCTGTAAAAGAGACATACATTTGCTTCACTTTGACATTGGTTTTGGCTTGTAGCTTTCTGACTGATACAATTGGTATCCATGCTCTTTTTGGTGCATTTGTGGTTGGTATAATTGTCCCAAAAGATGGTCCTTTTGCTGGGGTTTTGATTGAGAAGATTGAAGACTTGGTGAGTGGGATTTTCTTGCCACTATATTTTGTGTCTAGTGGGTTGAAGACAAATGTGGCTACTATTAGTGGAGGCACTTCTTGGGCGTTGCTTGCACTTGTCATATTCAATGCATGCTTTGGAAAGATTGTTGGTACTATTGTGGTGGCAGTCTCATGTAAGGTGCCTTTTAGAGAATCATTGGCACTTGGATTTCTCATGAACACTAAGGGTTTGGTTGAGCTCATTGTTCTCAACATTGGAAAGGATCGCAAGGTGTTGAACGACCAAGCATTTGCAATCTGTGTTCTGATGGCACTATTCACAACCTTCATCACAACACCAATAGTGATGGCAGTGTACAAGCCAGCTCGCAGGGGAGCACCGTACAAATACAAAACAATCCAGCGCAAGGATCTTGACACAGAGCTGAGGATGCTGGCATGCTTCCACAGCACACGCAGCATCCCAACTCTGCTCAACCTCATTGAATCTTCCCGAGGAACCAAGAAGTCAGGGAAGCTTTGCATCTACGCTATGCACCTTATGGAGCTCTCAGAGCGCTCCTCTGCCATCACTATGGTCCACAAGGCACGCAGGAACGGCCTTCCTTTCTGGAACAACAAACCCGACAACGACCGCAACGGCAACAACGACCACATGATCATTGCCTTTCAGGCTTACGGCAAACTGAACAAGGTTAATGTTCGTCCCATGACGGCTATCTCTGATCTCACTAACATCCATGAAGATATCTGCACTAGCTCTCATCAAAAGCGTGCTGCAATGATCATCCTTCCCTTCCACAAGCACCAACTCGTTGATGGATCCATGGAGTCCTTGGGAGGCTCGTTCCGTCACATGAACGAGCTTGTTTTGAGCCACGCTCCTTGCTCCGTTGGGATCTTGGTTGACCGTGGGCTAGGTGGGGCCAGCCAGGTGCAAGCATCTGACGTGGCATACAACATAGTTGTGTTGTTCTTCGGAGGGCGTGATTGTCGGGAGGCACTTTCTTATGGTATGAGGATGGCACAGCACCCGGGAATCTCGCTCACGGCGGTTAAGTTTGTTGCGGCGTCCGGGAAGAGCCTGGCGTTTGGGGCGAAGCTTGTTGCCGTGTCAGCAGACAAGCAACAGAAAGTGGTTACGGAGATCGATGAAAGTGAAAAGCGGTTAGACGAGGAGTTGTGGAACGAGTTCTTGGGGAAGTCAATCAAGTTTGAGGAGAGATTGGTGGAGAGCAGAAACGACATTGAGGTTGCGTTGAGGGAGATGAGTAAGTCCAGCCTTATTTTGGTTGGTAGAATGCCATCGGTTGCACCTTTGGTTTACAACAGTGATTCTGCTCAACTTGGACCCGTTGGAAGCTTCTTGGCTTCCTCTGAATTCTCAACCACTGCGTCTGTTGTTGTAATTCAACAGTATAATCCAGCTGCTGATGTTCACCCACTCGTCATGGAGGAAATTGAACACTCGGATGAGCCAGATACACCCATCTAA 2436 0.477 MATPNPQAAAAAVCPPPMKATSNGAFHHENPLDYSLPLLIVQICIVVCFTRLLAFICRPLRQPRVIAEIIGGLLLGPSAFGRNQKFLDTIFPKKSLTVLDTIANVGLLFFLFLVGLELDVRSIRRTGPKALAIAVCGITFPFTLGVGTSFVLRATISKGVQPLAFIVFMGVALSITAFPVLARILAELKLLTTDVGSIAMSAAAVNDVAAWILLALAIAISGENTSPLISVWVMLCGATFIVFAVYAIRPLLVIMAKRSLSGEPVKETYICFTLTLVLACSFLTDTIGIHALFGAFVVGIIVPKDGPFAGVLIEKIEDLVSGIFLPLYFVSSGLKTNVATISGGTSWALLALVIFNACFGKIVGTIVVAVSCKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKYKTIQRKDLDTELRMLACFHSTRSIPTLLNLIESSRGTKKSGKLCIYAMHLMELSERSSAITMVHKARRNGLPFWNNKPDNDRNGNNDHMIIAFQAYGKLNKVNVRPMTAISDLTNIHEDICTSSHQKRAAMIILPFHKHQLVDGSMESLGGSFRHMNELVLSHAPCSVGILVDRGLGGASQVQASDVAYNIVVLFFGGRDCREALSYGMRMAQHPGISLTAVKFVAASGKSLAFGAKLVAVSADKQQKVVTEIDESEKRLDEELWNEFLGKSIKFEERLVESRNDIEVALREMSKSSLILVGRMPSVAPLVYNSDSAQLGPVGSFLASSEFSTTASVVVIQQYNPAADVHPLVMEEIEHSDEPDTPI 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30480g00003 811 FunFam Cation/H(+) antiporter 15 38 440 - -
Stsc30480g00003 811 Gene3D - 38 440 IPR038770 -
Stsc30480g00003 811 PANTHER CATION/H + ANTIPORTER 13 788 - -
Stsc30480g00003 811 Pfam Sodium/hydrogen exchanger family 45 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30480g00003 Stsc-Chr30480 6845 10271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30480g00003 14 805 Antiporter Super Family AT3G17630 68.726 0.0 1072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30480g00003 K26731 - gmx:100815966 1213.36