Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30480g00002 ATGGCAGTTTCAGCAAAGATAACTTATCTTGTTGCCCTGCTTCTTCTGGTAATTATTGTTGAGGCCAAACATGTGAGCATCAAGAACATGCTAGGATCTGGGAAGAACATGAACCTGCATTGTCAATCCAAAGATACTGATCTGGGTGAGCATAACATAGCATATGGGGATGAGTTTGGGTGGGACTTCCATGACGATGTTGTTGGAACCACACTCTTTTACTGTGACTTGCAATGGGAGAGAGTTCAGGAGTACCATTTTGATGCCTATGACTTCCACAGGGACTTTGTCCGATGCGGCGATGATGGATGTTCATGGCTGATAGCTGCCGAAGGCATGTATGGTTCAAATAGCCAAACAGGGCTCTGGGAATTCATGTACTACTGGCCAAACTGA 396 0.452 MAVSAKITYLVALLLLVIIVEAKHVSIKNMLGSGKNMNLHCQSKDTDLGEHNIAYGDEFGWDFHDDVVGTTLFYCDLQWERVQEYHFDAYDFHRDFVRCGDDGCSWLIAAEGMYGSNSQTGLWEFMYYWPN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30480g00002 131 Pfam Plant self-incompatibility protein S1 24 129 IPR010264 -
Stsc30480g00002 131 PANTHER - 21 119 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30480g00002 Stsc-Chr30480 5130 5726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30480g00002 25 129 Carbohydrate Esterase AT3G16970 34.259 4.20e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30480g00002 - - gmx:102670225 197.208