Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30478g00008 ATGATGGTTGCGAGACGGCAAGGACTCCCAAAATCACAGTGGGCAAGCCCATATTATCAATTATCAAAACATGGAGTCATTCAGAAATATGGGACAAACCGTGATCAAAGAGCAACTTCTATTACTAATGGGATGAAAGTATGGAGTCGAAAACCTAAACCAGAAATTGATGGGATGGGTTCAAAAGCCAGACTGCTGAAAGAACCGGACAAGCATAAGAATCATGAAGTTTTGATAGGATCTATATCTGTTACTCTAGGCAATTGCAGCCAATCAATGGGTAGCCTTGTGCCATCTTATGGTGATGATATGGTGGAGAATCCGAGAAAGCAGAATACTGCACAGGAGAAGCCAGTGAAACCTGATTCTTTTGAGAGTGGCAACAACCGATCAACAATGAAGCTGTGGCGGCCAATTGGCCAACATAAAACCAAAGACCCATCTCCACTTCAAAATGGTAGAGCTGGAGCTGAAGCTTATGAAAAAGAGGATCAAAATTTGTCAGGTCAAAGTAGACTAAAGGTGTATAATATAAATCACAGTGATATTGATTTCAGGAACAAGTTTCCCAATCTTGGTGCTAAAGCAGATCCAAGAAGCCTTTTCTCCAGCCATGCTGCCAAAGTCTTTCTTGCAGAAAGATGGAAAGAAGCTATCTCATCAAACCATGTGAAATTGGTTGTTTCACCTGATTCTGAACCTNNNNNNNNNNATTCCAAGAGGTACAAGATAGTGAAGTGGCAGCATGTCAATTTTCCAATGCTGATAGATATAGCAGTGTTGCAAATGCAGAGAATCAATTGCATGCTACCTCCGGAGTTACTAAATCCAAAACCAAAATGA 843 0.4045 MMVARRQGLPKSQWASPYYQLSKHGVIQKYGTNRDQRATSITNGMKVWSRKPKPEIDGMGSKARLLKEPDKHKNHEVLIGSISVTLGNCSQSMGSLVPSYGDDMVENPRKQNTAQEKPVKPDSFESGNNRSTMKLWRPIGQHKTKDPSPLQNGRAGAEAYEKEDQNLSGQSRLKVYNINHSDIDFRNKFPNLGAKADPRSLFSSHAAKVFLAERWKEAISSNHVKLVVSPDSEPXXXXSKRYKIVKWQHVNFPMLIDIAVLQMQRINCMLPPELLNPKPK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30478g00008 280 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 7 238 - -
Stsc30478g00008 280 MobiDBLite consensus disorder prediction 117 135 - -
Stsc30478g00008 280 MobiDBLite consensus disorder prediction 97 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30478g00008 Stsc-Chr30478 39994 42499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30478g00008 2 233 C2H2 Transcription Factor Family AT4G25610 31.064 4.41e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30478g00008 - - gmx:100799153 269.626