Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30478g00007 ATGCGGGTACACCATCGATTGAAGAAGCTTGATAAGGATTCTAAGAAAAACAGAGATCTTCTAGGAGCTTATTGGGATAAGCTCTCTATAGTAGAGGCAAAGGAAGTTATGTCATTCAAGAATGTGGCGTTGGAGGAAGTTCCAGGGTCTTCAATTTTAAAAGCTTTGGCAAGTCTTACTCAAAAACAAGGATTTTCTTCTCTTCCACAGTATTATGTTAGGGCTGGTTCTGCCCTTTTGGATATTGTCGAATCCAGGCCTTCAAGCTTTCCTATATCTTCCCAAGAGTTATTCAGTATACTTGATGATTCCAGTGAAAAAACATTTTTGTGTGGGACAGCGGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCAAAAAACCTTGTTGCTAGCACTAGTTTCTTGGTAGAGCAGAAATTGGTGAAGGCATGGCTTGCAGACAAAGAAGCTGAAGCATTGAAGTGTCAGAAGCAGCTAGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGATTAGACAAAAAGAACAGAAGGGGAGGGAACTACTCGAAGATGACACTGAAATTAAACAGAACATCAATAGCACAGCAGAGGCTGTACTATCTGCAGAAGCATCTTTGGTTACATGTGTCTTTGAAGCACTCAATCATGATACATTTGCAGATCATTCTTCTTCACCACATGCAGCCGCCTGTAACTTTCCAGACATTTATGAAGGTGCTGACAGGGATACACAGTCAAGGTATCAATGTAACACTGATAAAAATATTGAGCGACAGACATCCCAAGGACATAGTCGCCGGCCCATGATGGTTGCGAGACGGCAAGGACTCCCAAAATCACAGTGGGCAAGCCCATATTATCAATTATCAAAACATGGAGTCATTCAGAAATATGGGACAAACCGTGATCAAAGAGCAACTTCTATTACTAATGGGATGAAAGTATGGAGTCGAAAACCTAAACCAGAAATTGATGGGATGGGTTCAAAAGCCAGACTGCTGAAAGAACCGGACAAGCATAAGAATCATGAAGTTTTGATAGGATCTATATCTGTTACTCTAGGCAATTGCAGCCAATCAATGGGTAGCCTTGTGCCATCTTATGGTGATGATATGGTGGAGAATCCGAGAAAGCAGAATACTGCACAGGAGAAGCCAGTGAAACCTGATTCTTTTGAGAGTGGCAACAACCGATCAACAATGAAGCTGTGGCGGCCAATTGGCCAACATAAAACCAAAGACCCATCTCCACTTCAAAATGGTAGAGCTGGAGCTGAAGCTTATGAAAAAGAGGATCAAAATTTGTCAGGTCAAAGTAGACTAAAGGTGTATAATATAAATCACAGTGATATTGATTTCAGGAACAAGTTTCCCAATCTTGGTGCTAAAGCAGATCCAAGAAGCCTTTTCTCCAGCCATGCTGCCAAAGTCTTTCTTGCAGAAAGATGGAAAGAAGCTATCTCATCAAACCATGTGAAATTGGTTGTTTCACCTGATTCTGAACCTNNNNNNNNNNATTCCAAGAGGTACAAGATAGTGAAGTGGCAGCATGTCAATTTTCCAATGCTGATAGATATAGCAGTGTTGCAAATGCAGAGAATCAATTGCATGCTACCTCCGGAGTTACTAAATCCAAAACCAAAATGA 1704 0.4108 MRVHHRLKKLDKDSKKNRDLLGAYWDKLSIVEAKEVMSFKNVALEEVPGSSILKALASLTQKQGFSSLPQYYVRAGSALLDIVESRPSSFPISSQELFSILDDSSEKTFLCGTAVSMQRYVFDGEAGKIGLEPKNLVASTSFLVEQKLVKAWLADKEAEALKCQKQLVEEEEAAQKRQAEILERKRQKKIRQKEQKGRELLEDDTEIKQNINSTAEAVLSAEASLVTCVFEALNHDTFADHSSSPHAAACNFPDIYEGADRDTQSRYQCNTDKNIERQTSQGHSRRPMMVARRQGLPKSQWASPYYQLSKHGVIQKYGTNRDQRATSITNGMKVWSRKPKPEIDGMGSKARLLKEPDKHKNHEVLIGSISVTLGNCSQSMGSLVPSYGDDMVENPRKQNTAQEKPVKPDSFESGNNRSTMKLWRPIGQHKTKDPSPLQNGRAGAEAYEKEDQNLSGQSRLKVYNINHSDIDFRNKFPNLGAKADPRSLFSSHAAKVFLAERWKEAISSNHVKLVVSPDSEPXXXXSKRYKIVKWQHVNFPMLIDIAVLQMQRINCMLPPELLNPKPK 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30478g00007 567 MobiDBLite consensus disorder prediction 404 422 - -
Stsc30478g00007 567 MobiDBLite consensus disorder prediction 384 446 - -
Stsc30478g00007 567 Coils Coil 153 199 - -
Stsc30478g00007 567 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30478g00007 Stsc-Chr30478 37747 42509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30478g00007 2 520 C2H2 Transcription Factor Family AT4G25610 40.943 1.51e-95 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30478g00007 - - gmx:100799153 666.766