Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30474g00001 | ATGTCAAATAATAATAATGATAATAGTAATATTTATTGTGAGGGAGAGTCAGGTGAGGGTGAGAGTGATGAGTTGAGCAACAATTGGGGTATTGAATTATCAGATTATTTGGCCATTGATGATGATACTCAATGGCTTGATGATGAGTCATTTGTTTCTCAGTATAATCTTAATCTTCAAAACCAGGTATTTCATCATCATCAAGCTATTCAAGTTGGAGAAGGTAGCACCAACTTTGAGGGCTCTTCAACCAATATAAACAGTGGGCATGAGAGGAGGGAAGCTAGACAGAGATATGCATTCAAAACAAAATCAGATGTTGAAGTGTTGGATGATGGATACAAGTGGAGGAAATATGGAAAAAAGATGGTCAAGAATAGCCCCAATCCAAGGAACTATTATAGGTGTTCAGTGGATGGATGCACAGTGAAAAAGAGAGTAGAGAGGGATAGGGATGATCCAAGGTATGTCATAACAACCTATGAAGGCATTCACATTCATCATCCTTCTTCTCATCGCTACTAG | 525 | 0.381 | MSNNNNDNSNIYCEGESGEGESDELSNNWGIELSDYLAIDDDTQWLDDESFVSQYNLNLQNQVFHHHQAIQVGEGSTNFEGSSTNINSGHERREARQRYAFKTKSDVEVLDDGYKWRKYGKKMVKNSPNPRNYYRCSVDGCTVKKRVERDRDDPRYVITTYEGIHIHHPSSHRY | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30474g00001 | 174 | SMART | WRKY_cls | 110 | 169 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc30474g00001 | 174 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Stsc30474g00001 | 174 | FunFam | WRKY transcription factor 57 | 96 | 170 | - | - | |
Stsc30474g00001 | 174 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 73 | 170 | IPR044810 | GO:0003700 | |
Stsc30474g00001 | 174 | SUPERFAMILY | WRKY DNA-binding domain | 103 | 169 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc30474g00001 | 174 | ProSiteProfiles | WRKY domain profile. | 105 | 170 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc30474g00001 | 174 | Pfam | WRKY DNA -binding domain | 111 | 167 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc30474g00001 | 174 | Gene3D | WRKY domain | 97 | 163 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc30474g00001 | 174 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30474g00001 | Stsc-Chr30474 | 868 | 2273 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30474g00001 | 98 | 167 | WRKY Transcription Factor Family | AT5G26170 | 84.286 | 5.78e-41 | 134 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc30474g00001 | WRKY | 3.2e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30474g00001 | - | - | gmx:100796836 | 197.593 |