Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30473g00009 ATGGATTTGAATTGGTTGTTCTTGTTGCCAATGAACGGTGACTCTGCTTCGTCAGCAGCAATATTATTCACTGCGGTAGCGATCATGGGAGGGTTGGTGGCGTATCTGTATGGGCCGCATTGGAAGGTGAGGAAGGTTCCAGGCCCACCAACATGGCCTCTCATAGGACACCTTCATCTCATGGCTAAGTATGGTCCTGATTTGTTCACACTTCTCGCCAAGAAATACGGCCTAATCTACAGATATCATATGGGAAGACAGCCACTAATAATAATAGCAGATGCAGAGCTTTGTAGAGAGGTTGGAACCAGAAAAGCAAAAGACATTCCACACAGAAGCGTACCCTCTCCTATTACAGCTGCTCCTATTCACCAAAAGGGTATATTCTTCTCCAGGGATGAACAATGGTCTACTATGAGAAGCACTGTTACTTCCTTCTTTCACACCTCATCCTTATCAAGCATGATCCCAACAATGCAGTCATTCATAGAATCTTCAACCCAGATTTTTGATTCCCATGCTGATACACAACAAGACATGGACTTCTCTAAGTTCTCTATCAAATTAGCAACTGATGTTGTTGGCCAAGCATCCTTTGGTGTCGACTTCGGCCTCTCTAAGCCTCATTCCACCACCAAAGATGGCGGCGACGAAGCATCACAGTTCATAAACCAACATGTCTTCAACACTACAAACCTCAAGATGGACTTGTCCGGTTCCTTATCCATCATAATTGGTCTGCTTCTCCCAATTCTTCAAGAGCCATGCAGGCAGATTCTCAAGAGGATACCTGGCACCATGGACTGGAAACTCGAGCGCGGTTATCGCGCTCTAGGTGGCCGTTTAGATAGGATTGTAGAGAAGAGAATGGAAGATAATAAGGGAAGAACTTCAAAGGATTACTTGTCAGTATTGCTGAGTGGAAGAGAAAGAAAACAGAACTACCTAACACAAGAATACATAAGTGCTCTTGCATATGAACAATTACTTACAGGATCAGCTACTGTTGCATTTTCCATGTCTTCCATTATATACTTGGTTGCAGCTCACCCTCATGTTGAGAAAAAGCTTCTTGAAGAGATTGATGGTTTTGGTCCAAAGGACAAGACTCCCACTCTTGAGGATCTTAAGGACAAGTTTCCTTATCTTGAACAGGTGATTCATGAATCAATGAGATATATGCCGTCATCCCCATTAATTGCAAGGGAAACAGCAACTGATGTAGAGATAGGAGGTTACTTACTTCCCAAGGTAACACATAACTACATATCATATGTTTTGGAATGTTCTTTACACAACACAATCACACTTTTTTATGTTTATACAGGGGGCCTGGGTGTGGTTATGCATCGGAGCTCTGTTAATGGATCCAAAAAACTTCCCGGAGCCAGAAAAGTTCAAGCCGGAGAGATTTGA 1416 0.4308 MDLNWLFLLPMNGDSASSAAILFTAVAIMGGLVAYLYGPHWKVRKVPGPPTWPLIGHLHLMAKYGPDLFTLLAKKYGLIYRYHMGRQPLIIIADAELCREVGTRKAKDIPHRSVPSPITAAPIHQKGIFFSRDEQWSTMRSTVTSFFHTSSLSSMIPTMQSFIESSTQIFDSHADTQQDMDFSKFSIKLATDVVGQASFGVDFGLSKPHSTTKDGGDEASQFINQHVFNTTNLKMDLSGSLSIIIGLLLPILQEPCRQILKRIPGTMDWKLERGYRALGGRLDRIVEKRMEDNKGRTSKDYLSVLLSGRERKQNYLTQEYISALAYEQLLTGSATVAFSMSSIIYLVAAHPHVEKKLLEEIDGFGPKDKTPTLEDLKDKFPYLEQVIHESMRYMPSSPLIARETATDVEIGGYLLPKVTHNYISYVLECSLHNTITLFYVYTGGLGVVMHRSSVNGSKKLPGARKVQAGEI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30473g00009 471 Gene3D Cytochrome P450 37 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30473g00009 471 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30473g00009 471 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30473g00009 471 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30473g00009 471 PANTHER THROMBOXANE-A SYNTHASE 19 419 - -
Stsc30473g00009 471 Pfam Cytochrome P450 47 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30473g00009 471 SUPERFAMILY Cytochrome P450 40 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30473g00009 471 CDD cytochrome_P450 79 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30473g00009 Stsc-Chr30473 57219 59851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30473g00009 84 424 Cytochrome P450 AT2G26170 59.249 1.85e-126 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30473g00009 K20771 - gmx:100797803 526.939