Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30473g00005 ATGAGCGGTGAGGATGATGACCCAGAAAGAGAAAGATTGAGATCAAGAAGAAGAGAAGAGGAAGAACAAGAAAGATCGTCGTTGAGTTCGAAGCAGTATTCAAAATTGGTGAGCTTTCACCGTGATCTCATGGCTGGGGCGGTTATGGGTGGGGTGGTTCACACCATTGTAGCCCCTATTGAGAGGGCGAAGCTTCTTCTGCAGACTCAAGAGAGCAATTTGGCTATTGTTTCGAGCGGGCGTCAAAGATTCAAGGGCATGTTTGATTGCATACTCCGCACTGTTAGAGAAGATGGTGTTCTCTCTTTGTGGCGTGGCAATGGCAGCAGTGTTCTTCGCTATTATCCTTCTGTTGCACTCAATTTCTCTCTCAAGGATCTATACAGGAGGATGTTAAGAGGTGAAAACTCTCATGACATTACCATCTTATCCGGCGCATCTGCCAATTTTGTCGCTGGTGCTGCGGCCGGTTGTACAGCACTTATCTTAGTATACCCCCTTGACATTGCACATACCCGCCTTGCTGCCGACATCGGAAGGAAAGAGGCGCGTCAATTTCGCGGCATCTACCATTTCCTGGCTACCATATTCCAAAAGGATGGGATCCGCGGGATTTACAGGGGCCTTCCTGCATCCCTACAGGGGATGGTGGTCCACAGGGGCCTTTACTTTGGAGGATTTGATACGATGAAAGAGATCCTATCCGAAGAAGAATCCAAGCCCGAGATTGCTCTGTGGAAGCGCTGGTTGGTAGCTCAGGCAGTAACAACCTCAGCGGGGTTGATATCTTACCCCTTAGACACGGTTCGCAGGAGAATGATGATGCAGTCAGGCATGGAACGGCCGGTGTACCACAGCACCCTGGATTGCTGGAGGAAGATCTATAGGACAGAGGGATTAGCTTCATTCTACCGCGGCACGGTTTCAAATGTGTTTAGGAGCACAGGTGCTGCAGCTATCTTAGTCTTGTATGATGAGGTTAAGAAATTCATGAATTGGGGGAGATTGTAA 1011 0.4886 MSGEDDDPERERLRSRRREEEEQERSSLSSKQYSKLVSFHRDLMAGAVMGGVVHTIVAPIERAKLLLQTQESNLAIVSSGRQRFKGMFDCILRTVREDGVLSLWRGNGSSVLRYYPSVALNFSLKDLYRRMLRGENSHDITILSGASANFVAGAAAGCTALILVYPLDIAHTRLAADIGRKEARQFRGIYHFLATIFQKDGIRGIYRGLPASLQGMVVHRGLYFGGFDTMKEILSEEESKPEIALWKRWLVAQAVTTSAGLISYPLDTVRRRMMMQSGMERPVYHSTLDCWRKIYRTEGLASFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWGRL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30473g00005 336 PRINTS Adenine nucleotide translocator signature 39 51 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30473g00005 336 PRINTS Adenine nucleotide translocator signature 117 129 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30473g00005 336 PRINTS Adenine nucleotide translocator signature 84 105 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30473g00005 336 PRINTS Adenine nucleotide translocator signature 248 264 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30473g00005 336 PRINTS Adenine nucleotide translocator signature 144 157 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc30473g00005 336 PRINTS Mitochondrial carrier protein signature 55 69 IPR002067 GO:0055085
Stsc30473g00005 336 PRINTS Mitochondrial carrier protein signature 252 274 IPR002067 GO:0055085
Stsc30473g00005 336 PRINTS Mitochondrial carrier protein signature 159 177 IPR002067 GO:0055085
Stsc30473g00005 336 PRINTS Mitochondrial carrier protein signature 106 126 IPR002067 GO:0055085
Stsc30473g00005 336 PRINTS Mitochondrial carrier protein signature 206 224 IPR002067 GO:0055085
Stsc30473g00005 336 PRINTS Mitochondrial carrier protein signature 42 55 IPR002067 GO:0055085
Stsc30473g00005 336 Pfam Mitochondrial carrier protein 37 134 IPR018108 -
Stsc30473g00005 336 Pfam Mitochondrial carrier protein 147 236 IPR018108 -
Stsc30473g00005 336 Pfam Mitochondrial carrier protein 243 332 IPR018108 -
Stsc30473g00005 336 FunFam probable ADP,ATP carrier protein At5g56450 41 333 - -
Stsc30473g00005 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 37 131 IPR018108 -
Stsc30473g00005 336 Gene3D Mitochondrial carrier domain 41 333 IPR023395 -
Stsc30473g00005 336 SUPERFAMILY Mitochondrial carrier 35 326 IPR023395 -
Stsc30473g00005 336 MobiDBLite consensus disorder prediction 1 29 - -
Stsc30473g00005 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 144 233 IPR018108 -
Stsc30473g00005 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 247 330 IPR018108 -
Stsc30473g00005 336 MobiDBLite consensus disorder prediction 1 28 - -
Stsc30473g00005 336 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 31 333 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30473g00005 Stsc-Chr30473 29746 33148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30473g00005 36 328 Antiporters AT5G13490 39.130 1.51e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30473g00005 K05863 - gmx:100797251 525.013