Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30472g00001 ATGGGTGAGAAGGGTCACGTTGAGGTGAAAAAAGTTCTTCATTTGGGGTCCTTGAACAATGTAATGATGATGGTGTTTGGGAAGTGCTATGATTTTTTGAATGGTGACGGTGTTATACTTGAAGAGCTTGTTAATGAAGGGTATGAGTTGTTGGGTGTCTTTAACTGGAATGACCATTTTCCTCTTCTTGGGTGGGTGGACCTTCAAGGTGTGAGGAGAAGGTGCAGGTGTTTGGTTTCAAAGGTGAATGCTTTTGTTGGGAAGATCATAGTGGATCATAGGATGAAGAGGGTTTCTGGTGGGTATGTTGCTAGTGAAACAGTTGGAGACTTTGTTGATGTCTTGCTTGATTTGGAGAAAGAAAACAGGCTCAGTGACGCTGACATGATTGCTGTTCTTTGGGAAATGATTTTTAGAGGAACAGATACAGTGGCTATTTTACTGGAATGGGTTCTTGCAAGAATGGTTCTTCACCCAGAGATGCAAACCAAGGCACAATGTGAAATTGATGAAGTTGTTGGATCAAGGCCGGTTTCGAATAATGACATACCCAACCTGCCTTACTTGCAGTGCATTGTGAAGGAGATTCTAAGGGTACACCCACCCGGTCCACTCCTTTCATGGGCCAGACTTGCCATAGGAGATGTTTGCATTGGTGATAAGCTCATACCGGCAGGAACCACCGCGATGGTTAACATGTGGGCTATAACTCACAATGCAAATGTGTGGTCAGAGCCTGATGTGTTCAAGCCTGAGAGATTTATGGAAATGGAAAGAGATATGAACATTATGGGTTGTGATCTTAGGCTGGCTCCATTTGGAGCAGGGAGGAGGGTTTGCCCTGGAAAATCCATGGGCCTGGCTACTGTTCACCTCTGGTTTGCTCAGCTTCTACAGGGCTTTCAATGGTTTCCCTGTGATGAGAAGCCTGTGGATTTGTCAGAGTGCCTCAAGCTTTCAATGGAAATGAAATCACCACTTATTTGCAAAGTTGTTCCTAGGGTTGTTGCTTGA 1014 0.4458 MGEKGHVEVKKVLHLGSLNNVMMMVFGKCYDFLNGDGVILEELVNEGYELLGVFNWNDHFPLLGWVDLQGVRRRCRCLVSKVNAFVGKIIVDHRMKRVSGGYVASETVGDFVDVLLDLEKENRLSDADMIAVLWEMIFRGTDTVAILLEWVLARMVLHPEMQTKAQCEIDEVVGSRPVSNNDIPNLPYLQCIVKEILRVHPPGPLLSWARLAIGDVCIGDKLIPAGTTAMVNMWAITHNANVWSEPDVFKPERFMEMERDMNIMGCDLRLAPFGAGRRVCPGKSMGLATVHLWFAQLLQGFQWFPCDEKPVDLSECLKLSMEMKSPLICKVVPRVVA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30472g00001 337 Gene3D Cytochrome P450 1 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS E-class P450 group I signature 16 34 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS E-class P450 group I signature 270 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS E-class P450 group I signature 232 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS E-class P450 group I signature 148 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS E-class P450 group I signature 128 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS E-class P450 group I signature 280 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 Pfam Cytochrome P450 4 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 SUPERFAMILY Cytochrome P450 4 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PANTHER CYTOCHROME P450 78A7-RELATED 4 334 - -
Stsc30472g00001 337 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 273 282 IPR017972 GO:0005506|GO:0016705
Stsc30472g00001 337 PRINTS P450 superfamily signature 139 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS P450 superfamily signature 191 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS P450 superfamily signature 271 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30472g00001 337 PRINTS P450 superfamily signature 280 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30472g00001 Stsc-Chr30472 17953 19603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30472g00001 5 337 Cytochrome P450 AT1G13710 65.487 1.93e-155 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30472g00001 K20619 - qsu:111986572 508.834