Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30471g00006 ATGGAGAACCCTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATGTGGTGATTGCATGCGATGCCACTAAGGATCGCAGTGAGAATGAGATTAAGCAAATCCTTGATAACATAAGAAAAAGGGGTGATCTTCTATCTGCTGGTGACAGGTTGCTTGTTTTCTCTGTATTGCATAGGGTGCTTAACCCCATGGGGTACCAGACCATAGCATGCCCAGAGTCTATGTTTGGCACGAATTTTAGGGCGATGGAGGAACAAGTTAAAAAGAAAGCTGATGCATATGCCATTGAGCTTTTTTCAAGTCATGAAGAATTTAAAAATGCAGGGCTTAGCGTCGAAGTAAAAGTCACTGCAGGATTTCCTCTTAGACAGTTCAATCTTTTACTTACCCTCCGAAGACTACGTTTCTTCCACCTTCTTGGATGCTCCGAATTACTCAAAATGGTTTTTAATGAAATCTGGAAAATTCGAAACAGGCACCTTAGGCGCGACATGAGATTCTACCTTAACAGGATACCATTCAAGGTTGGATTGGTTAAAGATGACTTCTCTGTAGATATCTGGAGATCCCATCATGCAAACATTTCACCCATCACAGAAACAAAGCCTGTCTATTCCTTTTACAAGTTTGTCTCTTTGGCAGATTGCCAAAGTATTGAAGACATTGAACAGCAATCTATTATCTCTTTCAAGAGTTTTCCCCATATGTTGACTTCTTCACATACTTCGGTCATGATTAAGAGCTATACAAAGCATTTGAATGCTAACGTATGGGAGCAGAGTTCTTCACTAGATTCTGGATCTTTTAAGCATGAAAGACCAGGCATAAGCATGAAAGAAGAAAAGCATACCGATAACTCTCAGGTTGGCCAAAAGCAGGGAGAATTTACAACACCACTTCTTTGTTCCAGCTGTAAGATACGTACGGAATTGTCTGTCAATGAGTTGACGAGGTTTTCCTATTCCGACATACAGCAAGCAACAAATGATTTTTCAAAGGATAACCTAATAGGTGAAGGTGGATTTGGTCATGTTTACAAGGGTGTTCTTAAAGATGGACAGCAAATTGCAGCAAAGGTAAGGAAAGAGCAAAGCTCACAAGGCTTTTCTGAGTTTCATTCCGAGGTAAGTGCTCCCCTTCTTGAGTGGAAACAAAGGTATGCTATTGCCATTGGAACTGCAAAGGGACTGCGTTTTCTGCACGAGGAATGCCGCGGTGGTCCTATTATTCATCGCGACTTGCGACCATGCAATATACTTCTCACTCATGATTATGTTCCCATGTTAGCTGACTTTGGCCTTGCCAAATGGAGGACTGGTGATGGTACTATGCACACCAGAATAATGGGCACAATAGGATACCTTTCTCCAGAGTATGCTGAAACTGGTGTAGTTACTGAAAGAACAGATGTGTATGCTTTTGGCATCGTTTTGTTACAACTGATTTCAGGACACAAGGTCTCCAATTTCCGCAATCCAGAACAACAATCTCTTAGACAATGGGCTATGCCAATCATTGAGTCGTTGACATTACACGAACTGATTGACACTCGTCTTGGGAATTCATATGACACATATCAACTATATCTCATGGCCAAAACCGCATTCTTCTGCGTCCAAATAGAGCCTGATGACCGTCCTTCAATGGGAGAGGTTGTGCGACTTCTTGAGGGAGAAAGTAAAGACTTCCACACACTGGGAGAACATTTGTTGCCAAATTATAACAGCTAA 1776 0.4133 MENPHSSSSSSSSSSSSSSSSSSSSSSSSYVVIACDATKDRSENEIKQILDNIRKRGDLLSAGDRLLVFSVLHRVLNPMGYQTIACPESMFGTNFRAMEEQVKKKADAYAIELFSSHEEFKNAGLSVEVKVTAGFPLRQFNLLLTLRRLRFFHLLGCSELLKMVFNEIWKIRNRHLRRDMRFYLNRIPFKVGLVKDDFSVDIWRSHHANISPITETKPVYSFYKFVSLADCQSIEDIEQQSIISFKSFPHMLTSSHTSVMIKSYTKHLNANVWEQSSSLDSGSFKHERPGISMKEEKHTDNSQVGQKQGEFTTPLLCSSCKIRTELSVNELTRFSYSDIQQATNDFSKDNLIGEGGFGHVYKGVLKDGQQIAAKVRKEQSSQGFSEFHSEVSAPLLEWKQRYAIAIGTAKGLRFLHEECRGGPIIHRDLRPCNILLTHDYVPMLADFGLAKWRTGDGTMHTRIMGTIGYLSPEYAETGVVTERTDVYAFGIVLLQLISGHKVSNFRNPEQQSLRQWAMPIIESLTLHELIDTRLGNSYDTYQLYLMAKTAFFCVQIEPDDRPSMGEVVRLLEGESKDFHTLGEHLLPNYNS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30471g00006 591 Gene3D Phosphorylase Kinase; domain 1 327 390 - -
Stsc30471g00006 591 ProSitePatterns Tyrosine protein kinases specific active-site signature. 424 436 IPR008266 GO:0004672|GO:0006468
Stsc30471g00006 591 PANTHER OS01G0750732 PROTEIN 286 392 - -
Stsc30471g00006 591 Gene3D Transferase(Phosphotransferase) domain 1 391 581 - -
Stsc30471g00006 591 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Stsc30471g00006 591 SUPERFAMILY Protein kinase-like (PK-like) 327 572 IPR011009 -
Stsc30471g00006 591 SMART tyrkin_6 346 571 IPR020635 GO:0004713|GO:0006468
Stsc30471g00006 591 ProSiteProfiles Protein kinase domain profile. 273 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30471g00006 591 MobiDBLite consensus disorder prediction 1 29 - -
Stsc30471g00006 591 Pfam Protein kinase domain 400 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30471g00006 Stsc-Chr30471 31371 36545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30471g00006 332 574 Trihelix Transcription Factor Family AT1G70460 40.411 2.79e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Stsc30471g00006 Pkinase 2.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30471g00006 - - vun:114163670 685.256