Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30464g00002 ATGGTGATGACGATGGAGATGGGAATAGGAGAGGCCCTTATAGTAGTAAGTATGGCCATTGTTTTAGTTTTAATGGTGATGAAGAAGAATGTGAATTGGTGGCTGTATGAATCCAAATTGGGAGATATGCAGTACTCTCTGCCACCTGGTGACATGGGATGGCCCTTCATTGGCAATATGTGGTCCTTCCTCAGAGCTTTCAAGTCCTCTGATCCCGACTCCTTCCTCTCCGCTTTTGTCTCCAGATTTGGAAAAACTGGAATTTACAAGGCCTTGATGTTTGGGAACCCAAGTGTGATAGTGACAACACCTGAAACATGCAGAAGGGTCTTAACAGATGATGAAAAATTCCAACCAGGTTGGCCTACATCTACCATTGAGCTTGTTGGCAAGAAGTCATTCATTATGATGCCCTACGACGAACACAAGCGCCTCCGGCGCCTGACATCTTCGTCGATCAACGGCATGGAGGTGCTGTCAATTTACTTGAAATATATTGAAGAAAATGTGATAAGCTCATTGGAGAAATGGACCAAAATGGGACAAATTGAGTTCTTAACTGAGATAAGGAAGCTTACATTTAAGATCATAATGCATATTTTCCTAAGCTCAGAAAGTGAACCTATTATGGAAGCATTGGAAAGGGAATACACTGCTCTTAACTATGGAATTAGAGCCATGAAGATTAATATTCCTGGATTTGCATACCATAAAGCATTCAAGGCTAGGAAAAATCTATTGTCTGTATTTCAATCTATTGTGGATGAGAGAAGGAAATTAAGGAAGGAATGTTCACCTAAGGTCAGGGATATGATGGATTCTCTGCTAGATGTTGAAGATGATAATGGAAGAAAGTTGAGTGATGAAGAAATCATTGATGTCATGTTGATGTACTTGAATGCTGGCCATGAATCTTCAGGACATATTACAATGTGGTCAATCTATTTCCTCCAAAAGCACCCTGAATATCTCCAAAAGGCTAAGGAAGAGCAAGAAGAAATAATAAAGAGAAGACCACCAACTCAGAAAGGGTTGACACTAAAGGAAATTAGACAGATGGATTTTCTCTACAAGGTGATTGATGAAACAATGCGGGTGATTACATTCTCATTGGTGGTTTTTAGGGAGGCGAAATGCGATGTTGTTATGAATGGTTACACCATTCCAAAAGGTTGGAAAGCTCTTGTGTGGTTCAGATCAGTTCATCTTGATCCTGAGATATATCCTAATCCAAAGGAATTTAATCCCCACAGATGGGATGCTAATGAACATAAGGCCGGAGAATTTCTTCCCTTTGGAGGAGGAACTAGACTCTGTCCTGGGAATGATCTTGCTAAGATGGAAATAGCAGCTTTTCTTCACCATTTTGTTCTTAATTACAGATTTGAACAGCTTAATCCTAAATGCCCTGTAAGATACTTACCTCATACAAGGCCAATGGACAATTGCTTGGGAAGGTTAAAGAAATGTTCAACATCAACCTAA 1485 0.4007 MVMTMEMGIGEALIVVSMAIVLVLMVMKKNVNWWLYESKLGDMQYSLPPGDMGWPFIGNMWSFLRAFKSSDPDSFLSAFVSRFGKTGIYKALMFGNPSVIVTTPETCRRVLTDDEKFQPGWPTSTIELVGKKSFIMMPYDEHKRLRRLTSSSINGMEVLSIYLKYIEENVISSLEKWTKMGQIEFLTEIRKLTFKIIMHIFLSSESEPIMEALEREYTALNYGIRAMKINIPGFAYHKAFKARKNLLSVFQSIVDERRKLRKECSPKVRDMMDSLLDVEDDNGRKLSDEEIIDVMLMYLNAGHESSGHITMWSIYFLQKHPEYLQKAKEEQEEIIKRRPPTQKGLTLKEIRQMDFLYKVIDETMRVITFSLVVFREAKCDVVMNGYTIPKGWKALVWFRSVHLDPEIYPNPKEFNPHRWDANEHKAGEFLPFGGGTRLCPGNDLAKMEIAAFLHHFVLNYRFEQLNPKCPVRYLPHTRPMDNCLGRLKKCSTST 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30464g00002 494 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 SUPERFAMILY Cytochrome P450 45 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Stsc30464g00002 494 PANTHER CYTOCHROME P450 26 45 476 - -
Stsc30464g00002 494 Gene3D Cytochrome P450 38 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 Pfam Cytochrome P450 48 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30464g00002 494 CDD CYP90-like 80 489 - -
Stsc30464g00002 494 FunFam Ent-kaurenoic acid oxidase 38 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30464g00002 Stsc-Chr30464 6323 13446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30464g00002 29 487 Cytochrome P450 AT1G05160 67.462 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30464g00002 K04123 - gmx:100781238 838.565