Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30463g00012 ATGCTGAAGGAACTCACCTTCTTGGGCCTGGAACTGAACAATCTAACCGGGTCAATTCCACAAGCAGTTGGTGACCTTCCAAACTTGAACTTCCTCCTTCTCTTCAACAACTCACTCACCGGAATTCTCCCTCAGAAGCTTGGCTCCAAAGGTTTGTTACAGAAAGTGGATGTTTCAACCAACTTTCTAGAAGGTCCCATTCCTCCAAGCCTCTGCAACGGCAACAACCTCAGCAGGCTCATCCTCTTCTCTAACCGTTTTAACGGTTCTCTTCCGAGTTCACTGGTTAACTGTATCTCCCTCTCAAGGGTTCGCATTCAGAATAACCGCCTCAACGGTCAAATTCCGTTAGGTCTTGGTCAACTCCCTAACCTGACGTTCCTTGACATCAGCGACAACGAATTCAGCGGGAGAATTCCCGATGATTTCGGCAATGCCGTAAGGCTTCAGTTCTTGAACATCTCCGGCAACGCGTTCGAGAGCGCCTTGCCGAGCAACATATGGAACTCCACCAGTCTCCAGATCTTCTCCGCCGCGGGTTCCAAGATCACCGGCGAGATTCCTGACTTCGTAGGGTGCAAGAACATATACAGGATCGAGTTGCAGGGGAATTCACTCACCGGAAGCATTCCGTGGGATATTGGACACTGCGAGAAGCTGATTCAGCTGAACCTGAGTAGAAACTCTCTCACCGGAATCATTCCATGGGAGATCTCGGCGCTGCCTTCGATCACCGACGTGGATCTCTCGCACAACTCACTCACCGGAACAATTCCTTCGAACTTCAACAACTGCACCACGCTCGAGAACTTCGACGTCAGTTTCAACTCCCTCACCGGACCTATACCTTCGTCGGGGATCTTCCCGAACCTCCACCAGTCGGAATTCTCCGGCAACCCCGGCCTCTGCGGCGGCATGGTCGCGAAGCCATGCGCGGCTGAGATGCTAAGCCCGGAGGACAACCAGGTCGACGGTCGCCGGCAGGAGCCGAGGAAAACTGCCGGCGCTATCGTGTGGATCGTTGCGGCGGCGTTCGGGATCGGAGTTTTCGTCCTCGTAGCGGGGACACGGTGCTTCCACGCGAATTATGGGCGCCGTTTCGGTAACGACGGTCAGGAGATGGGACCGTGGAAGTTAACGGCGTTTCAACGGCTTAATTTCACGGCGGATGATGTGTTAGAATGTTTGTCGATGTCTGACAAGATCTTAGGGATGGGGTCCACTGGAACAGTTTACAGAGCGGAAATGCCAGGTGGCGAGATCATAGCGGTTAAGAAGCTGTGGGGAAAGCAAAAGGAGAATATCCGTCGGAGGAGAGGGGTTCTTGCTGAGGTGGAGGTGTTGGGGAACGTGAGGCACAGGAATATAGTGAGGTTGTTAGGGTGCTGCAGCAACAAAGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGCAACTTAGATGACTTGTTGCATGGCAAGAACAAGGGTGATAATCTCGTTGCTGATTGGTTCACTAGGTACAAGATTGCCCTTGGTGTGGCACAGGGGATTTGCTACCTTCACCATGATTGCGATCCGGTTATCGTTCATCGTGATCTAAAACCTAGTAATATTTTGTTGGATGCTGACTTGGAGGCCAGGGTGGCGGATTTTGGGGTGGCCAAGTTGATTCAGACGGATGAGTCCATGTCCGTTATTGCCGGATCATATGGTTATATTGCCCCGGAATACGCATATACTCTTCAAGTAGATGAAAAGAGTGACATTTACAGCTACGGGGTGGTGTTAATGGAGATCTTAAGTGGGAAACGTTCAGTGGATGCAGAATTTGGAGATGGGAATAGCATTGTTGATTGGGTGAAGTCCAAGATAAAGAGCAAAGATGGGATTAATGATATATTAGATAAGAATGCAGGTGCAGGGTGTTCCTCAGTGAGGGAAGAGATGATTCAAATGCTTAGAATTTCATTGCTTTGCACAAGCAGGAACCCAGCTGATAGGCCTTCAATGAGGGATGTAGTGTTGATGCTTCAAGAAGCCAAGCCTAAAAGGAAGTTGCTGGATAGTATTGTTATAGGTCGATGCGGCGGCGACGGCGACGGCGACGGTGGCGACAATGTGGTGGTTTGTGGTGGTGAAATTCCTTTGGCACAAAAGCCCACGGCGGAAAGCTAG 2160 0.5079 MLKELTFLGLELNNLTGSIPQAVGDLPNLNFLLLFNNSLTGILPQKLGSKGLLQKVDVSTNFLEGPIPPSLCNGNNLSRLILFSNRFNGSLPSSLVNCISLSRVRIQNNRLNGQIPLGLGQLPNLTFLDISDNEFSGRIPDDFGNAVRLQFLNISGNAFESALPSNIWNSTSLQIFSAAGSKITGEIPDFVGCKNIYRIELQGNSLTGSIPWDIGHCEKLIQLNLSRNSLTGIIPWEISALPSITDVDLSHNSLTGTIPSNFNNCTTLENFDVSFNSLTGPIPSSGIFPNLHQSEFSGNPGLCGGMVAKPCAAEMLSPEDNQVDGRRQEPRKTAGAIVWIVAAAFGIGVFVLVAGTRCFHANYGRRFGNDGQEMGPWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYRAEMPGGEIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNKECTMLLYEYMPNGNLDDLLHGKNKGDNLVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADLEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVKSKIKSKDGINDILDKNAGAGCSSVREEMIQMLRISLLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDSIVIGRCGGDGDGDGGDNVVVCGGEIPLAQKPTAES 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30463g00012 719 SUPERFAMILY Protein kinase-like (PK-like) 400 672 IPR011009 -
Stsc30463g00012 719 Pfam Leucine Rich Repeat 124 145 IPR001611 GO:0005515
Stsc30463g00012 719 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 366 475 - -
Stsc30463g00012 719 Pfam Protein kinase domain 400 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30463g00012 719 FunFam leucine-rich repeat receptor-like protein kinase TDR 476 684 - -
Stsc30463g00012 719 Gene3D Phosphorylase Kinase; domain 1 378 475 - -
Stsc30463g00012 719 SMART serkin_6 397 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30463g00012 719 ProSitePatterns Protein kinases ATP-binding region signature. 403 426 IPR017441 GO:0005524
Stsc30463g00012 719 FunFam Leucine-rich repeat receptor-like protein kinase TDR 1 313 - -
Stsc30463g00012 719 ProSiteProfiles Protein kinase domain profile. 397 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30463g00012 719 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 674 - -
Stsc30463g00012 719 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Stsc30463g00012 719 Gene3D Transferase(Phosphotransferase) domain 1 476 685 - -
Stsc30463g00012 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Stsc30463g00012 719 SUPERFAMILY L domain-like 2 303 - -
Stsc30463g00012 719 Gene3D Ribonuclease Inhibitor 1 316 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30463g00012 Stsc-Chr30463 60148 63615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30463g00012 2 680 Receptor kinase-like Gene Family AT1G08590 44.000 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc30463g00012 Pkinase 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30463g00012 - - gmx:100809695 1185.24