Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30462g00007 ATGGAGATTCTAGTTCTTGTTCTAAGTTTTGCATCCTTCTTTCTTCTCTTCATAATCACCCAAAGACAAAACACAAGAACAAGATCATCACTTCCTCCTGGCCCTAAAGGCCTTCCTCTAATTGGAAATCTCCACCAACTTGATTCCAAATCCCCACATAACTATTTTAGAGAACTCTCCAAACACTATGGCCCCATCATGTCCTTCAAACTTGGCTCAACACAAGCCCTTGTTATTTCCTCATCAAAATTAGCCAAAGAAGTGTTAAAGACACATGACCTTAAATTTGCAAGTAGGCCACCTTTGTTAGGCATCAAGAGATTGTCCTATAATGGCTTGGACTTGGGTTTTGCACCTTATAGTCCTTATTGGAGAGAGATGAAGAAGCTTTGTGTTTTGCACCTATTTAGCTCTCAAAGGGTCCATTCTTTTAGACCCTTTAGAGAACAAGAGGTTGCAAACATGATTAGGAAGATATCCCAACATAAAGTTGTAAACTTGACTGAAATTTTGATGTCTTTTACCAACACTTTGATATGTAGGGTTGCTTTGGGGAAAGATTATGGTAATGAGTACCAAGTTGTTGATGAAGGATTAGGGTTTGGCCAAAGGAGCAAGTTGCAAGTGTTGCTAAATGAGGCTCAAGCATTGTTGGTTGAGTTTTACTTTTCAGATCATTTTCCAATGTTGGGGTGGGTTGATTGGCTTAGAGGGAAACTTTGGAGGCTAGAGAAGAACTTCAAGGAATTTGACAAGTTCTATGAAAGAGTTATCTATGACCATATGAATAATAAGTCCAATGAGAAAAAAGTTCAAGACATCATTGATATCTTTCTAGAGATGATGAATGATCACTCACTCCCCTTTGATCTCACCCTAGATCATATAAAAGCTGTGCTCATGAACATCTTTGTAGCTGGAACAGACACAAGTGCAGCTACAACAGTTTGGGCAATGAATGCACTTATGAAGAGTCCTAAATCCATGAAAAAGCTTCAAACTGAGATCAGAGGTTTATTTGGGGACAAAGATTTCATAAATGAAGATGACATTCAAAGGCTTCCATATCTAAAAGCAGTAATAAAAGAAACATTAAGAATGTTCCCACCATCACCACTACTATTACCAAGAGAAACAATTGAGAAATGCAACATAGAAGGCTATGAAATTAAACCAAAAATTTTAGTGTATGTTAATGCATGGGCTATAGCAAGGGACCCCAAGAATTGGAAGGACCCAGAAGAGTTTTGTCCTGAAAGATTCATTGAGAATTCATCGATAGATGTGAGGGGGAATGATTTTGAGGTGATTCCATTTGGTAGTGGAAGAAGAATATGCCCTGCTATGAACATGGGGTTGGTTACCATAGAAATTGCATTGGCAAATCTTGTTCACTCATTTGATTGGGATTTGCCAATTGGGTTTGACAAGGAAGAAATGTTTGATACGCAAGTGAAGCCAGGGATAACTATGCACAAGAAAAACGATCTTTTTCTTGTGGCTAAGAAACATTAA 1515 0.3809 MEILVLVLSFASFFLLFIITQRQNTRTRSSLPPGPKGLPLIGNLHQLDSKSPHNYFRELSKHYGPIMSFKLGSTQALVISSSKLAKEVLKTHDLKFASRPPLLGIKRLSYNGLDLGFAPYSPYWREMKKLCVLHLFSSQRVHSFRPFREQEVANMIRKISQHKVVNLTEILMSFTNTLICRVALGKDYGNEYQVVDEGLGFGQRSKLQVLLNEAQALLVEFYFSDHFPMLGWVDWLRGKLWRLEKNFKEFDKFYERVIYDHMNNKSNEKKVQDIIDIFLEMMNDHSLPFDLTLDHIKAVLMNIFVAGTDTSAATTVWAMNALMKSPKSMKKLQTEIRGLFGDKDFINEDDIQRLPYLKAVIKETLRMFPPSPLLLPRETIEKCNIEGYEIKPKILVYVNAWAIARDPKNWKDPEEFCPERFIENSSIDVRGNDFEVIPFGSGRRICPAMNMGLVTIEIALANLVHSFDWDLPIGFDKEEMFDTQVKPGITMHKKNDLFLVAKKH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30462g00007 504 CDD CYP71-like 63 497 - -
Stsc30462g00007 504 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Stsc30462g00007 504 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PANTHER CYTOCHROME P450 71B11-RELATED 16 502 - -
Stsc30462g00007 504 FunFam Cytochrome P450 83B1 18 500 - -
Stsc30462g00007 504 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30462g00007 504 Pfam Cytochrome P450 32 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30462g00007 Stsc-Chr30462 29172 31405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30462g00007 3 504 Cytochrome P450 AT4G31500 45.669 2.21e-160 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30462g00007 - - aip:107646223 833.558