Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30459g00007 ATGGATGACATGAATTACACGATGATTTCTGAGTCCTCATATGAATCAGAATCGATTATGCAGCAGTTTCCACATGACATTGATGATGAGTATACTCCGAAGACTGGAATGACTTTCCCAACACTTGAAGAAGCTGCTGCCTTCTATAAGGGGTATGCTAAACGTGCAGGGTTTTCCACCAAAATAAGGAACACCAATAGGTGTAAGGAGACTAAGGAAGTTAAGAATCAACTAATCACATGTAATAGAGAGGGGAAATGGGTGTCTGAAATACCTTACGTTGAGAACGTGCGGTGCAAACTGTCCTGCGCGAATTTATGTGCATGCAGTGAAGAAAACAAGGCTCTGGTGTATTTCAAAGGTTGTTTTTCACCATTCACATCCATGTTGTCCTTATCAAGCCCAGATGTTACCTCAGCATAG 423 0.4161 MDDMNYTMISESSYESESIMQQFPHDIDDEYTPKTGMTFPTLEEAAAFYKGYAKRAGFSTKIRNTNRCKETKEVKNQLITCNREGKWVSEIPYVENVRCKLSCANLCACSEENKALVYFKGCFSPFTSMLSLSSPDVTSA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30459g00007 140 Pfam FAR1 DNA-binding domain 48 90 IPR004330 -
Stsc30459g00007 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30459g00007 Stsc-Chr30459 29465 30415 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc30459g00007 FAR1 4.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30459g00007 - K13993 adu:110280446 90.5077