Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30456g00009 ATGGCTAGAGAAGTTATTGCCACTCCACCTGGTGCTTCAGATGACTATGATATGTTGGAAGGTGATTCTGACATCACCGGAACTGTTTCCAGGCGCCCAAGTCCATGGATTGAACCTGAAAGATTAAAACTCAGGCACAGAATTGGTCGGGGACCCTTCGGGGATCTATGGCTAGCAACTCATCATCATTCCACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTATATCCAATCAGAGAGGATAATACAAAGATTATATTAGAGAAGTTCAATCAATTATATTCTAAGTGCCAAGGAGTTGCTGGTGTTTGCTGGCTACATGGAATTTCAATCATAAATGGAAGGATATGCATCATTATGAACTTGTATGAGGGTTCGGTTGGTGACAAGATGGCTAGACTTAGAGAAGGGCGGGTTTCGTTGCAAGATGTTTTAAGGTACGGGATCAATCTGGCTCAAGGTGTTTTGGAACTTCATTCTAAAGGGGTCCTTATTCTCAACCTTAAACCATTCAACGTTCTTCTCAGTGACAATGATCAAGCAATTTTGGGAGATGTTGGCATTCCCAATCTCTTGTTTGGCTCCTCATATCTAAGCTCAGATATGGCTCAGAGGCTTGGAACTGCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGATCAGAGGCCCTATATCCTTCGAAACAGACTCGTGGGGATTCGGCTGCACCATCGTTGAAATGTTGACTGGTAATCAACCTTGGTATGGATACCCTGTTAGTGGAGTTTACAACTCAGTTGTTGAAAAGCATGAAAAGCCCCTTGTTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATCTCCTCAATGGATGCTTCGAGTATGATTTGAGGAATCGCCCACTGATGAAAGATATTCTGCGTGTCTTCAAAAGCACACTTGACGAACTGGCAAATGATGGAGGATGGAGATATCTTGGAAATGTGAAAGCTAATGCAAAATCAAGTAGCACTGGCTACACCGAGTGGTTTCTCTCAAAGGATCCTCTTCAAGTGCGTGATACGGTGCGATCCAGGAAGCCTTTCAATTCATGCACACCTCAAAATATGGATGTCCCAGGTGGAACTGTTGTTGGTCTAGAACGTAATCCAGATAATGGATTTGTTCTTGTGAGGGTCCATGGCATTCACGACCCAATAAGAGTTCATGCTTCAACCCTTGAACGTGTCACGTTTGGTCTGGCGGCTGGCGATTGGGTTCGATTGAAGGATGAAAATGAGAAACACTCACCAGTTGGCATTTTACATTACATTGAGCGTGAAGGTAGAGTTACTGTGGGATTTATCGGTCTGACGACCCTTTGGAAGGGAAATTCTTCGCAACTCGAAATGGCTAAATCGTACTGTGTTGGCCAGTTTGTTAGGCTGAAAGAGAATGTCTTGAGTCCCCGATTTGAATGGCGTAAACGAGGAGGGGCCTGGGCTACTGGCAAGATTTCTTGGATCCTACCAAACGGGTGTTTGGTTGTCAAGTTCCCAGGGCTGCTGCCTTTTGGTAACGAATGGAGAACCTTCCTGGCTGATCCTTCTGAGGTTGAAATGGTTGATTTCAAGACTTGTCCCGGGATGATAGAGAAGTATCAACATGTTGAGGATCATCATTGGGCAGTTAGACCTGTTCTAATTGTGTTTGGCATATTCACAGCTTGGAAATTCGGAATGTTTGTCGGAAAGAAGGTAGGGAGGAGCATGAAGAAAGTTAATGCAATAGACAGTGAAGTTGATGGTCAAAATGGTAACAATACTGCAAGGAGATCTTCCACTGCTATAATGAATCCTGGCAACACAACTTGGGTTCCTTCGGTCGCCAACATCCTCTTCAAAGAAGGCGGTTCCACCCCCACTGCTCGGTAG 1902 0.4458 MAREVIATPPGASDDYDMLEGDSDITGTVSRRPSPWIEPERLKLRHRIGRGPFGDLWLATHHHSTEDYDEYHEVAAKMLYPIREDNTKIILEKFNQLYSKCQGVAGVCWLHGISIINGRICIIMNLYEGSVGDKMARLREGRVSLQDVLRYGINLAQGVLELHSKGVLILNLKPFNVLLSDNDQAILGDVGIPNLLFGSSYLSSDMAQRLGTANYMAPEQWEPEIRGPISFETDSWGFGCTIVEMLTGNQPWYGYPVSGVYNSVVEKHEKPLVPSGLPSSVENLLNGCFEYDLRNRPLMKDILRVFKSTLDELANDGGWRYLGNVKANAKSSSTGYTEWFLSKDPLQVRDTVRSRKPFNSCTPQNMDVPGGTVVGLERNPDNGFVLVRVHGIHDPIRVHASTLERVTFGLAAGDWVRLKDENEKHSPVGILHYIEREGRVTVGFIGLTTLWKGNSSQLEMAKSYCVGQFVRLKENVLSPRFEWRKRGGAWATGKISWILPNGCLVVKFPGLLPFGNEWRTFLADPSEVEMVDFKTCPGMIEKYQHVEDHHWAVRPVLIVFGIFTAWKFGMFVGKKVGRSMKKVNAIDSEVDGQNGNNTARRSSTAIMNPGNTTWVPSVANILFKEGGSTPTAR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30456g00009 633 PANTHER OS06G0639500 PROTEIN 1 629 - -
Stsc30456g00009 633 Gene3D Transferase(Phosphotransferase) domain 1 39 333 - -
Stsc30456g00009 633 SUPERFAMILY Protein kinase-like (PK-like) 39 306 IPR011009 -
Stsc30456g00009 633 Pfam Protein tyrosine and serine/threonine kinase 42 304 IPR001245 GO:0004672|GO:0006468
Stsc30456g00009 633 ProSiteProfiles Protein kinase domain profile. 42 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30456g00009 633 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30456g00009 Stsc-Chr30456 49132 52288 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30456g00009 37 313 MAP Kinase Kinase Kinase AT2G17700 25.267 4.15e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Stsc30456g00009 PK_Tyr_Ser-Thr 9.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30456g00009 - - gsj:114393396 971.844