Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30456g00002 ATGTTTTCCAAACACAATGCTCCAAAAGCAGAAGATCCAAGACTCAAGGCCATCACAGAAGCCATCAGAGTGGTTCCTCACTTCCCCAAACAAGGGATAATGTTTCAGGACATAACGACATTGTTGTTGGATCATAAGGTTTTTAAGGACACAATTGACATTTTTGTTGATCGTTATAAAGACATGGGAATTTCAATTGTTGCTGGAGTTGAAGCTAGGGGATTCTTTTTTGGCCCCTCAATTGCATTAGCCATTGGTTCAAAGTTTGTTCCTTTGCGCAAACCTCGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAAGTGATTGCTTGGAGATGCATGTTGGTGCTGTGAAACCTGGTGACAAAGCCATTGTTATTGATGATTTAGTGGCTACAGGTGGAACTCTCTCTGCAGCAATTAGTCTCCTAGAACGTGGTGGTGCTGAAGTAGTGGAATGTGCTTGTGTCATTGGTCTCTCTCATTTTAAGGATGATTGCAGTGTGAATGGAAAACCGCTTTATTTTCTTGTGGAACCGCGTCTACAGTAG 567 0.4127 MFSKHNAPKAEDPRLKAITEAIRVVPHFPKQGIMFQDITTLLLDHKVFKDTIDIFVDRYKDMGISIVAGVEARGFFFGPSIALAIGSKFVPLRKPRKLPGEVISEKYVLEYGSDCLEMHVGAVKPGDKAIVIDDLVATGGTLSAAISLLERGGAEVVECACVIGLSHFKDDCSVNGKPLYFLVEPRLQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30456g00002 188 FunFam Adenine phosphoribosyltransferase 1 6 185 - -
Stsc30456g00002 188 Gene3D - 6 184 IPR029057 -
Stsc30456g00002 188 Pfam Phosphoribosyl transferase domain 58 163 IPR000836 -
Stsc30456g00002 188 CDD PRTases_typeI 52 184 IPR000836 -
Stsc30456g00002 188 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 186 - -
Stsc30456g00002 188 SUPERFAMILY PRTase-like 22 165 IPR029057 -
Stsc30456g00002 188 NCBIfam adenine phosphoribosyltransferase 19 178 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc30456g00002 188 Hamap Adenine phosphoribosyltransferase [apt]. 18 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30456g00002 Stsc-Chr30456 14685 17664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30456g00002 11 184 PRT Gene Family AT1G27450 68.391 2.42e-85 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30456g00002 K00759 - mof:131158221 311.227