Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30455g00010 ATGAATCTCCCTTCTCTCACTTATCTCCCTCAGAAACTTGTTCCTTCTGTCTGCTCTGCTCTTCCCAACTCCACCAGGAGTAGTGGTAGTGCTCATAATATTGCTATTGAAGGTTGCAACCTAAATTTCTCGTTCACAGCAACGAGGCAAGTGAAAGTTGTGCCCGTGCTTAGGGATTGTTCGTTTCGCATTCCTTGTGGGCAGTTTTGGATGCTTCTTGGACCCAATGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTATTGAATCCAACTTCAGGAACAGTGCATGTGAATGAGCCTAAGAGTTTTGTTTTTCAAAATCCTGACCATCAGGTGGTGATGCCAACCGTGGACGCCGATGTTGCATTTGGTCTTGGTAAGTTCAGCTTGACTGATGATGAAGTAAGGTCTAGGGTGTCAAGAGCCTTGCATGCCGTAGGCCTCTCCGATTATAAGAAGAGATCTGTCCAAACTCTGAGTGGTGGTNNNNNNNNNNGAGGGTTGCCATTGCCGGTGCTTTGGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAG 579 0.4542 MNLPSLTYLPQKLVPSVCSALPNSTRSSGSAHNIAIEGCNLNFSFTATRQVKVVPVLRDCSFRIPCGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVHVNEPKSFVFQNPDHQVVMPTVDADVAFGLGKFSLTDDEVRSRVSRALHAVGLSDYKKRSVQTLSGGXXXXGLPLPVLWQKLVKFCCWMSSQHS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30455g00010 192 Gene3D - 31 184 IPR027417 -
Stsc30455g00010 192 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 36 165 - -
Stsc30455g00010 192 Pfam ABC transporter 57 166 IPR003439 GO:0005524
Stsc30455g00010 192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 166 IPR027417 -
Stsc30455g00010 192 CDD ABC_cobalt_CbiO_domain1 42 165 IPR015856 GO:0005524|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30455g00010 Stsc-Chr30455 55208 63577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30455g00010 36 101 Calmodulin-binding Proteins AT2G36910 30.303 2.23e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30455g00010 - - gmx:100813654 242.662