Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30455g00003 | ATGTCTCAAGGCTATTACTCAGAGTCATATCCTTCTTCTGATTCTGGATCTGATAACATTTCAGATGCTGCTTCAGCTGAACTCAAGCTCTACAGAGCATTCATTTTCTCAGCACCAATCTTCTTCACTTTCATTCTCCTCTTCCTCTTTTATGTCTTCTATCTTCGACCCAGAAGGGTTGATTGGTCCTCCCTTAGGATGAGACCCTTTTCTTTTCCTCCTCCTCACTCTAACTCCAACACCATCTCCACGTGGGATATTGGCCTGAAGAAAGAATTCAGAGAGATGCTGCCTATTATTGTCTACAAGGAAAGCTTCTCTGTCAAAGATACCCTATGCTCAGTGTGCCTTTTGGACTACCAAGCAGAGGATAGGCTTCAACAGATACCTGCATGTGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTTGCCAGCCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTACTAGCTTCGGCTAAATCTTCAACAGAGCCTTCCAACCTGCAGGTCGATGGGCCACAGAGCAATGAGGAAACACAGACCATAGAATCATCCGAGTTGCAATCTACGAGTCATGTAGAAACCACTGTTTCTCAGAATGTCTCAGGAGAGGTGTCAATTGTCTCTCACTGCATCGATGTTGAAGGACAAAATGAGCAAAACAATCAGTAG | 681 | 0.4537 | MSQGYYSESYPSSDSGSDNISDAASAELKLYRAFIFSAPIFFTFILLFLFYVFYLRPRRVDWSSLRMRPFSFPPPHSNSNTISTWDIGLKKEFREMLPIIVYKESFSVKDTLCSVCLLDYQAEDRLQQIPACGHTFHMSCIDLWLASHSTCPLCRLSLLASAKSSTEPSNLQVDGPQSNEETQTIESSELQSTSHVETTVSQNVSGEVSIVSHCIDVEGQNEQNNQ | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30455g00003 | 226 | MobiDBLite | consensus disorder prediction | 166 | 196 | - | - | |
Stsc30455g00003 | 226 | FunFam | RING-H2 finger protein ATL7 | 79 | 160 | - | - | |
Stsc30455g00003 | 226 | SUPERFAMILY | RING/U-box | 97 | 160 | - | - | |
Stsc30455g00003 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 113 | 155 | IPR001841 | - | |
Stsc30455g00003 | 226 | CDD | RING-H2_EL5-like | 113 | 155 | - | - | |
Stsc30455g00003 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 160 | IPR013083 | - | |
Stsc30455g00003 | 226 | Pfam | Ring finger domain | 113 | 155 | IPR001841 | - | |
Stsc30455g00003 | 226 | PANTHER | OS11G0150450 PROTEIN | 41 | 203 | - | - | |
Stsc30455g00003 | 226 | SMART | ring_2 | 113 | 154 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30455g00003 | Stsc-Chr30455 | 14583 | 17333 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30455g00003 | 25 | 226 | C3H Transcription Factor Family | AT4G10150 | 51.707 | 2.04e-64 | 198 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30455g00003 | K19039 | - | gmx:100794211 | 261.536 |